Solea senegalensis (Senegalese sole): 122781008
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Entry
122781008 CDS
T07721
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122781008 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122781008 (prpf38a)
Spliceosome [BR:
ssen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122781008 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
122781008 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
122781008
NCBI-ProteinID:
XP_043900430
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All DBs
Position
LG14:23694257..23698426
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AA seq
308 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
FGGNTKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKSQNRDGEFELMHVDEFVDDLLHAERMCDIILPRLQKRQVLEEAEMLDTR
ISALEEDLDEVESSEDEDEEEEKPERLQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRRNE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaaccgtcaaagatgctaacagtatccatggaacgaacccgcagtatctg
gtggagaaaatcatccgaactcgaatctacgagtctaagtactggaaggaggagtgtttc
ggtctgaccgccgagctggtggttgacaaggccatggagctaaagtatgttggaggagtt
tttggcgggaacaccaagcccacgcccttcctctgcctcacgctaaagatgctgcagatt
cagccagagaaagatatcattgttgagttcataaagaacgaggatttcaaatatgttcgt
ttacttggggcgatgtacatgaggttaacgggcaccgcggtggattgttacaaatacctg
gagcctctgtacaacgactacaggaagatcaagagtcaaaacagagatggagaatttgag
ctgatgcacgtggacgagtttgtggatgatcttcttcatgcagagaggatgtgtgacatc
attcttccccggctccagaaaagacaagtcttggaggaggctgagatgttggatacacgt
atcagtgctttagaagaggacctggatgaagtggaaagcagtgaagatgaagatgaggag
gaagagaagccagagagactccagacccctgaaccccacagacgcagttaccgtgacaac
gacagacctcgtcgctctccatcacctcgctacagacgaagtcgctcacccagacggagg
agcagatctccgaagaggaggagcccatcaccgaggagagaccgccaccgcagcaaaagc
cctcgcagacatcgcagtcggtccagggacagacgtcaccgctccaaatctccaggtcac
cacagaagtcacagacatcgcagccactcaaagtccccagaaaggagctcaaaaaagagt
cacaagaagagtcgaagaaacgagtga
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integrated database retrieval system
