Solea senegalensis (Senegalese sole): 122781128
Help
Entry
122781128 CDS
T07721
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122781128 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
122781128 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122781128 (thoc1)
03041 Spliceosome [BR:
ssen03041
]
122781128 (thoc1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122781128 (thoc1)
Spliceosome [BR:
ssen03041
]
Complex C
Other components
EJC/TREX
122781128 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122781128 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
122781128
NCBI-ProteinID:
XP_043900587
LinkDB
All DBs
Position
LG1:15669561..15675528
Genome browser
AA seq
657 aa
AA seq
DB search
MCANMSPSLFNFVEAKDKFTASARSALTGKSGKHLLNVFNQITGNESEKKTTLDQALRGV
LGDQIEQKTCCDDYLSLIYLSIDAVKEGICSATTPFILLGDVLDCLPLDQCDKIFSFVED
NVSTWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQ
SQFNLDNITVFNKNEQETTFSQKPAEEKEDGMEVEEGEMGEDDAPAPCSIPIDYNLYRKF
WTLQDYFRNPVQCYDKFSWMTFLKFSDETLAVFKSYKLDDTQASKRKLEELRASGGEHVY
FAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLSGQVKFKSSNCVLNDDQTTWIEETT
KLVYQLLREIPPDGDKFATMVEHILNTEDNWNAWKNEGCPSFVKERAVDDKPKRPTRKRQ
APEDFLGKGPDRKIFMGNDELTRLWNLNHDNMEACKSDSREFMPSLDEFFAEAIEQADPV
NMVEDEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDI
PSEEIKTGEDDDDDNGDNLLKDSNDSPSIQSKMVTNQQMDDVAAKLGAQWKTLASHWEMK
AAELREIETDSEDVDMQAKLLLVAWQDREGTQATVESLVTALNAVGFSQIADSLSEA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcaaatatgtcgccgtccttatttaattttgtagaggctaaagacaaattcacg
gcttctgccagatctgccctgactggaaagagtggcaaacatttgttaaatgtttttaac
cagatcaccggcaatgagtcagaaaagaaaaccacacttgaccaggccctgcggggtgtt
ctcggtgatcagattgagcagaagacgtgctgtgatgattacctgtctctcatctacctg
agtattgatgctgttaaagagggcatctgctctgctacaacacctttcattttgctgggg
gacgtactggactgccttcctctcgaccagtgtgacaaaatattctctttcgtagaggat
aatgtctccacctggaagtcgaattccttctacactgctggaaagaactacctgttgagg
atgtgtaatgatcttttgagaagactttccaaatcccaaaatacagtattttgtgggaga
atccagctttttttggcacgtctcttccctctgtccgagaaatctggtctcaatctccag
agccagtttaatcttgacaatataacagtgttcaataagaatgaacaagagactactttc
agccagaagcctgcagaagaaaaggaggatggtatggaggtggaggaaggagaaatgggc
gaggatgacgctcctgcaccatgctccattccgattgattacaacttgtacaggaagttc
tggaccctgcaggactacttcagaaaccctgtgcagtgttatgataaattctcctggatg
acgtttcttaagttctcagatgagaccttggcagtgttcaagagctataaactggatgac
acgcaggcctctaagaggaaactagaggagctgagagcatctggaggagaacatgtctac
tttgccaagttcctcacaagcgagaagctgatggatttgcagctcagtgacagtaatttc
agacgacacattcttcttcagtacctcattctcttccagtacttgagtggtcaggtcaag
ttcaaaagctccaattgtgtcctgaatgatgatcagactacatggatagaagaaacgact
aaactggtctatcagctgctgagggagatcccccctgatggagacaagtttgccaccatg
gttgagcacatcctcaacacggaggacaactggaacgcctggaagaacgagggatgccca
agttttgtgaaagagagggcggtagacgacaaaccaaaaagacccaccaggaaaagacaa
gcgccagaggatttcctcggaaaagggccagaccgcaagatcttcatgggaaatgatgag
ttgactcgactctggaacctgaaccacgacaacatggaagcctgcaagtcagacagcaga
gagttcatgccatcgctggatgaattctttgcagaagccattgaacaggctgaccccgta
aacatggtggaggacgagtacaaagtcgtacgaaacccaaactacggctggcgcgctctc
aggctgctttccagaagaagtccacacttctttcaaccaactaaccagaagtttaagagc
ctggcagactaccttgatagcatggtcagcaaattggccaaagaactgccgaaggacatc
ccctctgaagagatcaagacgggagaagatgatgacgatgacaatggagacaatctcctc
aaagacagcaatgacagtccgagcatacagagcaagatggtgactaaccagcagatggac
gatgtggcagctaaactcggagctcagtggaagacgctggcctcccattgggagatgaag
gcagcagagctgcgggagatcgaaacggacagtgaggatgttgacatgcaggccaaactg
ctgctcgtggcctggcaggacagagagggaacacaagctactgtggagagcctggtgaca
gctctaaatgctgttggcttctcccagattgcagacagcctcagtgaggcttaa
DBGET
integrated database retrieval system
