Solea senegalensis (Senegalese sole): 122781260
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Entry
122781260 CDS
T07721
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122781260 (rnf13)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122781260 (rnf13)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122781260 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
DUF7027
Prok-RING_4
zf-RING_16
zf_RING_Vps8_fungal
zf-RING_4
PHDvar_NSD
PHD
RINGv
DUF7313
zf-RING-like
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122781260
NCBI-ProteinID:
XP_043900805
LinkDB
All DBs
Position
LG14:10114868..10153795
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AA seq
384 aa
AA seq
DB search
MLLSLGMLMLSGTQIYTIFTVQLFAFLNLLPVEADIAAYSFDNKTENFDDLPARFGFRLP
SDGLKGFLIGARPENACEPIEPPPRDNLTGAFIVLIKRLDCNFDIKVLNAQKAGYKAAIV
HNVDSDDLISMGSNDLEVLKQIDIPSVFVGEVTANSLKDDYAYDKGGYVVLMPDFSLPLE
YYLIPFLIIAGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKSGDNYDVCA
ICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVIPSQGDSESDSEDGES
GPDENEEVSESTPLLRSLASTSAHSFGTMSGASHSEHDQESSEYEDDELDSSDSEEEVTV
ETVVVQLQQPSSEGHDHEHNLPKA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgtcgctgggaatgctgatgctgtcgggcacacagatctacaccatcttcacc
gttcagctcttcgctttcctcaacctgctgcctgtggaggccgatatcgctgcttactca
tttgacaacaaaacagagaactttgatgacctgcctgcgcggttcggctttcgtcttccc
agcgatggactgaagggcttcctgatcggtgcccggccggagaatgcgtgcgagcccatt
gagcctcctccgagggacaacttgacaggtgccttcattgtcctcatcaagagattggac
tgcaactttgacatcaaggtcctcaatgcccagaaagcaggttacaaggcagccattgtt
cataatgtggactctgatgacttgatcagcatgggatcaaatgacctggaggttctgaag
cagattgatattccctctgtgtttgtgggtgaggtgactgccaattctctgaaagacgac
tacgcatacgacaaggggggatatgtggtcctcatgccagacttcagcctgccgctggaa
tattacctgatccccttccttatcatcgcaggaatctgcctcatcctcattgttgtcttc
atgatcaccaagtttgtccaggatcgacacagagctcgtaggagtcgcctgcgcaaagat
cagctcaagaaacttccaattcacaagttcaaatcaggagacaactatgatgtctgtgcc
atttgcctggacgaatatgaagatggagacaagctccgagtcctgccatgttctcacgcc
taccacagtaagtgtgtggacccgtggctgaccaaaaccaagaagacctgtccggtgtgc
aaacagaaggtgatcccctcgcagggcgactcggagtcggattcagaggacggcgagagc
ggccccgacgagaacgaggaggtgtcggagagcaccccgctgctgcgctccttggcctcc
accagcgcccactcctttgggaccatgtcaggagcgtcgcactcggagcacgaccaggaa
tcctccgagtacgaggacgacgagctggacagcagcgacagcgaggaggaggtcactgtg
gagaccgtggtggtgcagctgcaacagccttcctccgaaggccacgaccacgagcacaac
ctgcccaaagcttga
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integrated database retrieval system
