Solea senegalensis (Senegalese sole): 122781335
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Entry
122781335 CDS
T07721
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122781335 (ddx10)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122781335 (ddx10)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
90S particles
Helicases
122781335 (ddx10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
122781335
NCBI-ProteinID:
XP_043900927
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All DBs
Position
LG14:21461156..21465587
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AA seq
843 aa
AA seq
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METKRLDSKGKKNKPGKKFDGADPVKNFERWKKKYSKTKARVKRERAGNKKPEWQVEREY
INKLVSRYGQINAKDAVKFSDFPISKKTLLGLQGAQYRQPTEIQRQTIGFALQGKDVLGA
AKTGSGKTLAFLIPILECLFRQQWSSMDGLGALIISPTRELAYQTFEVLRKIGKNHEFSA
GLIIGGKELKSETERIHRTNIVICTPGRLLQHMDETATFHASDLHMLVLDEADRILDMGF
ADTLNAILENLPKTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQSY
VVCELHQKVNMLFSFIRSHLTKKIIVFFACCKEVQYLFRVFCRLRPGMPILALHGKQQQM
KRVEVYNDFIRKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEG
GEALLLLLPSEEKGMLTQLQEKKVPINKIQVNPEKLQAVQQKLQAFLAQEKEQKDRAQRC
FVSYLRSIYLMKNKEVFDVFKLKIQEYAVSLGLAVAPRVRFLNKAQVQRAEKDGQREEQQ
SEEEEELKSFKAKLTGNVPHEGQNSESEESSNGEESDDEQDVKQKRMLLLGADDNSEEEE
DLKDLDLFTVKTKDVFSVTQEQEDPEESPEDPKKKKAVTKYTEAKKILKKKFKVNTKVTF
DEEGEAVQLWPPVQHTVASEEEEEEDVSGINVEKAKERLKREDQEFDKQEYSRKVKAKHR
EKRLKAKAARREASRQHGEQSDDEEDEVHAYLANYSDDEFDPSTLPDPDKVRSQEEEEDE
EEDDHVTRSTKRQQSSESSDEEDEELTAGKRKKVKVNDEHKPLDTGLSLAEDEELVLHLL
GGQ
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaagcgcttagactcgaaggggaagaaaaacaaaccggggaagaagtttgac
ggcgccgacccggtgaaaaacttcgagagatggaagaaaaagtacagcaagacgaaagct
cgagtgaagcgagagagagccggcaataagaaacccgagtggcaggtggagcgtgagtac
atcaacaagctggtcagcagatacggacaaatcaacgccaaggacgctgtcaagttttca
gacttccccatttcaaagaagactctgctgggtcttcagggggctcagtacaggcagccc
acagagatccaaaggcagaccattggtttcgctctgcagggtaaagatgttctgggcgca
gccaagactggctcagggaagactttggcttttctcataccaatcctggagtgtcttttc
cgacagcagtggagctccatggacggcctcggtgccctcattatatcccccaccagagaa
cttgcataccagacttttgaagttcttcgcaagattggcaagaaccacgagttctcagca
ggactcatcattggcggcaaggagctgaagagcgagaccgagaggatccaccgcaccaac
atcgtcatctgcaccccgggccggctgctccagcacatggacgaaacggccaccttccat
gcatctgacctgcacatgctggtcttggacgaggccgaccgcattctcgacatgggtttc
gcggatactctgaatgccatcctagagaacctgcccaagacccgtcagacgctgctgttc
tccgccactcaaaccaagtcggtcaaagacctggcccggctcagcctcaaagacccagag
tatgtgtgggtgcatgagaaagcaaagttcagcacaccggcgaccttggagcagagctat
gtggtgtgtgagctccaccagaaggtcaacatgctcttctccttcatcaggagccacctg
acaaagaagatcattgttttctttgcctgctgcaaggaggtgcagtacctgttccgcgtc
ttctgccgcctcagacccggcatgcccattttggctttgcatggcaagcagcagcaaatg
aagagggtggaggtctacaacgacttcatcagaaagcagaacgctgtgctcttcgccact
gatatcgctgccagaggcctggacttccccgccgtcaactgggtgctgcagttcgactgt
ccagaggatgcagacacctacatccacagggtggggcggactgcccggtacaaggagggt
ggagaggccctgttgctgcttctgccctctgaggagaagggcatgctgactcagctgcag
gagaagaaagttcctatcaataagatccaagtgaacccagagaagctgcaggctgtccag
cagaagctgcaggccttcctggcccaggagaaggagcagaaggacagagctcagaggtgt
tttgtgtcctacctgcgctccatctacctaatgaagaacaaagaggtgtttgacgtcttt
aaattgaagatccaggagtacgccgtctccctgggccttgctgtggctccgagagtgcgc
ttcctgaataaagctcaggtacagagggctgagaaggatgggcagagagaggagcagcag
tctgaggaggaggaggagctgaagagctttaaggccaagctcacgggaaacgttcctcat
gaaggtcagaactcagaatcagaagagtccagcaatggtgaggaaagtgatgatgagcaa
gatgtgaagcagaagaggatgttactgctgggtgcagatgacaacagcgaggaggaggag
gatctgaaggacctggatctgttcacagtgaaaacaaaggatgtcttcagtgtcacacag
gagcaggaggacccagaggagtctcctgaggaccccaaaaagaaaaaggcagtgacaaag
tacacagaggccaaaaagatccttaagaaaaagtttaaagtcaacaccaaagtgactttc
gatgaggaaggagaggctgtgcagctttggccacctgtccaacacacagtggctagcgaa
gaggaggaagaggaggatgtttcaggtatcaacgtggagaaggccaaggagagactgaaa
cgtgaagatcaggagtttgacaagcaggagtacagccgcaaggtgaaagccaaacacaga
gagaagcggctgaaggccaaggcagccaggagggaggccagtcgacagcacggagagcaa
tctgacgacgaagaggacgaggtgcacgcgtacctggccaattacagtgacgatgagttt
gaccccagcacactgcctgaccctgacaaagtgcgctctcaggaggaagaggaggatgaa
gaggaggacgatcatgtgacaagatcaacgaaaaggcagcagagcagcgagagcagcgat
gaggaggatgaagagctcacagcagggaagaggaagaaagtaaaggtgaatgatgagcac
aaacctctggacactggtctctctctggctgaggatgaggagttagtgttgcatctgtta
ggaggacagtag
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