Solea senegalensis (Senegalese sole): 122781421
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Entry
122781421 CDS
T07721
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122781421
Membrane trafficking [BR:
ssen04131
]
Protein recycling
Others
Others
122781421
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
InlK_D3
Motif
Other DBs
NCBI-GeneID:
122781421
NCBI-ProteinID:
XP_043900987
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Position
LG15:complement(3391701..3466459)
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AA seq
1237 aa
AA seq
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MEMRLGHWLLIIYYEWIWLFTLTSILDGTNAEVRCIPSCQLPLTAAASLPWELSALDLAH
FGDAPEEQFAGSNEDLPCAKPCPAGADDKHSVAELTSEESSSQVHALLRGNGTSVRQEDA
VKDKLSNSEGFFHAPENEPERSSGHARSSHGENAEHEEASEDTDVASWRRTRRSAETWPG
FREEGEDEVSFSDPEEFQLTSSTFALSGDTAHNQAMVHWSGQNSSVILMLTKYYDFNTGR
VTESSLWRSTDYGTTYEKLNEKVGPKTVLSYLYVSPNNKRKIMLLTDPEVESSLLISLDE
GASYQKHSLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQLVHDGVVPNRFYWS
RLGLDKEQGMIHLEISVSDGRSQYITCKLQNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQ
VPVGGQSVHYVSYRRNAFYPMKLPKYTLPKDLQIISTDDNQVVAAIQDQHQNDSYNLYMS
ESRGLLFTLMLEDVVSSRGPEGNIMIDLYEVAGIKGVFLSNKVVENQVKTYITYNKGRDW
RLLQAPTTDLQGNAVYCEQPLCSLHLHLHVSENPYTSGNIVSKDSAPGIIIASGVVGPEL
TSNNVSIFITSDAGNTWREVFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLSFDEGRNWD
KYSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKIDFRSIFQHRCTSDDYQSW
QLHDEGEVCIMGMKRIFQKLKTNVRCVKARDQYISLMSESCPCTDADFECDYGFERQTDG
SCTPAFWFVPSAVSRDCITGESFLNTTGYRRALSNNCTEGTLLKYSPRRQKCPTQAPRGL
QLFTSEGTLVATLGKNVTFLVFLEEGLGFTTSITVDFGDGTAMSYVNISSIEDGVKHIYS
KVGIYQVSATASNTLGFDRVILYLHVSCQLEHVQLSAPAVVVKNKAVNFTTVLRPGTVGT
VIYYWWLDNKTEPTVTLDGTMSLIFSKKGSYTVTVQASVGNTVHQDQMTVAVYDYFRSYV
LAFSSNLDELNPGVQEWREDICRVVKNSVVQVTGISEDQLLVTVLPGLPTTAEIFIVPEK
RSRDGGAVHEKWAHLDQLSQVLLSALNQDLVQFTLKPGVQVNVYATRLSPAPLVDSSVSG
HSSTAVILLVSGALMGLAIFMIYTFKRKFPGMHTYTAEQPDKEQEVIPTVASIASSDPEG
DKLTSLEHVDVQLNSHSRGYLPSHTDIKLSDEAPHVF
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcgcctcggtcactggcttttgatcatttattatgagtggatctggctcttc
accctaacttccatcctggacggaacaaacgcggaggtaaggtgcattccgtcctgccag
ctgccgctcacagcagcagcatcacttccctgggaactctctgcgctggatttggctcat
tttggcgacgcaccagaggaacagttcgctggatctaacgaggacctcccgtgcgccaaa
ccctgccccgccggtgccgacgacaagcacagcgttgcggaacttacgagcgaagaaagt
tcgtcccaagtgcatgcgctgttgcggggaaacggaacaagtgtccgccaggaggacgca
gtaaaggacaaactttccaactcggaagggttttttcacgcgcctgaaaacgagccagag
aggagcagcggtcacgcacgaagctcccacggagaaaatgcggagcacgaggaggcaagc
gaggacacggatgtggccagttggagacgaacgcgcaggagcgcagagacttggcccggg
tttagagaagagggcgaggacgaggtttccttctcggacccggaggagtttcagctcaca
agttctacgtttgctctgagcggggacacggctcacaaccaggcgatggtgcactggtcc
ggacagaacagcagcgtgattctcatgttgacgaaatactatgacttcaacactggaaga
gtcacagagagctctttgtggaggtcaaccgattacgggaccacgtacgagaagcttaac
gagaaagtcgggccgaaaaccgtcctgagctacttgtacgtgagtccaaacaacaagagg
aagatcatgctgctgaccgacccggaggtggagagcagcctgctcattagcctcgacgag
ggggcgtcctatcagaaacacagcttagcctttgatatcctcagcctgcttttccacccc
gagcaggaggactggatcttggcttacagccacgaccaaaagctctatgtctcggttgag
tttgggaggaggtggcagcttgtgcacgatggcgtcgtccccaacagattctactggtcc
agactgggcttagacaaagagcaggggatgattcacctggagatcagcgtctctgacgga
cggtcacagtacataacgtgcaaacttcagaactgctccgacggaaacaagggcaaacct
ttcccaggatttatcatccccaactccctggtggttcaggacgagtacgttttcatccag
gtgccagtcggcggccagtccgtccattacgtgtcctacaggagaaatgctttctacccg
atgaagcttcccaagtacactctcccaaaggacttgcagataatcagcaccgacgataac
caggtggtggcagcgattcaggaccagcaccagaacgactcctacaacctgtacatgtct
gagtccagaggacttctcttcaccctgatgctggaggacgtcgtgagcagtcgagggcct
gagggaaacatcatgatcgacctgtacgaggttgctgggattaaaggggtgttcctgtca
aataaagttgtcgagaaccaagtgaaaacttatatcacctacaacaaggggagagactgg
cgtcttcttcaggctcctacaaccgatctccagggaaacgcggtttattgtgagcagccg
ctctgttcgttacatctgcaccttcatgtgtcggagaatccttacacgtcgggaaacatt
gtcagcaaagactcagcgccgggaattataatagcatcaggtgtcgttggacctgagctc
accagcaataatgtcagtattttcatcacatctgacgctggaaacacctggagagaggtt
tttcaggaggagtacagcgtgttcttcttgaaccaaggaggatctctggtggccatccga
cacacacctctgccaattaggcacatttggctgagttttgatgagggcagaaactgggac
aaatatagcttcacctcctctccactctatgtggatggcgtcctgggggagcctggagag
gacaccctcatcatgacaatattcggtcacttcagtcatcgctccgagtggcaactcgtc
aaaattgacttccggtccatttttcaacaccgctgcacgtcggacgattatcagtcgtgg
cagttgcacgatgagggcgaagtgtgcatcatgggaatgaagagaatcttccagaaactt
aaaacaaacgttcgatgtgtcaaggccagagatcagtacatttccctgatgtcagagtct
tgcccgtgcacagacgcagattttgagtgcgactatgggttcgagaggcagacggacggg
agctgcacgccggctttctggttcgtcccttcggcggtatcaagggactgcatcacgggg
gagagcttcctcaacaccacaggatatcgcagggctctgtcaaacaactgcactgaagga
actctgctgaagtacagccccaggcgtcagaagtgtcccactcaggccccaaggggtctg
cagctcttcaccagcgagggaacactggtggcaaccctggggaagaatgtcaccttcttg
gtttttctggaagagggcctcggcttcacgacgagtataacggtggactttggcgacgga
acggccatgtcctacgtcaacataagctccatcgaggacggggtcaagcacatctacagt
aaagtcggcatttaccaggtctctgcgacagcgagcaacacgctgggcttcgacagagtg
attctctacctgcacgtctcctgtcaactcgaacatgtccagctctcggctcctgccgtg
gtcgtcaagaacaaagcggtaaacttcaccacagtgttacgtcccggcaccgtggggacc
gtcatctattactggtggttggataacaaaacagagccaactgtgactctggacggaaca
atgtccttaattttctccaagaagggaagttacactgtcactgttcaggcttcggttggc
aatactgtacatcaggaccagatgactgtggcagtttatgattatttccggtcatacgtt
ttggccttttcttccaacttggacgagctgaaccccggggtccaggagtggagagaggac
atctgccgagtggtgaagaactctgtggttcaggtcacgggaatcagcgaggatcagctc
ctcgtcacggtgcttccaggtttaccgaccacggcggagattttcatcgtgcccgagaag
aggtcgagagacggaggagccgtgcatgaaaagtgggcgcacctggatcagctttcacag
gttctgctaagtgctctgaaccaggacctcgttcagttcacactcaagccgggggtgcag
gttaacgtatatgccacgcggctgtctccagctcctcttgtggacagcagtgtgagcggc
cacagcagcaccgcagtcatcctgctcgtttcgggcgcactgatgggcttggccatcttc
atgatatatacattcaaaaggaagttccccggcatgcacacgtacacagcagagcagccc
gacaaagaacaagaggtcatcccgacagtggcctccatcgccagctcggatcccgagggg
gacaaactgacctcgctggaacacgtggacgtacagttgaactcacacagcagaggctac
ctgccatctcacacagacatcaagctctctgatgaagcgccccatgtgttttaa
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