Solea senegalensis (Senegalese sole): 122781435
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Entry
122781435 CDS
T07721
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122781435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122781435
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122781435
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
122781435
Messenger RNA biogenesis [BR:
ssen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
122781435
Transfer RNA biogenesis [BR:
ssen03016
]
Prokaryotic type
tRNA degradation factors
122781435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-GeneID:
122781435
NCBI-ProteinID:
XP_043901013
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All DBs
Position
LG15:14257590..14265736
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AA seq
770 aa
AA seq
DB search
MSYLLRLGPSFARIHVRLCHQSVYNSHANARGVTVNLGEKKLEISTGKFARFADGSAVVQ
FGDTSVMATAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRREMGTTDNEILTSRLI
DRSIRPLFPSGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRVG
MLDGQLLINPTRAEMTSSTLNLIVAGSPSSQVVMIEASAENVLQQDFCHALKVAVKHTQQ
IIFAIQQLVREQNVTKRTPVKVFSAPTDIVQHVRQLASERIYAVFTDYSHDKISRDEAIN
KIRLETEEELKEKFPQAEAFEVIESFNSVSREIFRNLVLKEYRRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLCSITFDSLESSIKADIITTALSGIKDKNFMLHYEFPPYAT
NETGKMGGMNRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACSGSLA
LMDAGVPISSAVAGVAIGLISQASEEKPAEIQDYRILTDILGIEDYLGDMDFKLAGTSKG
INALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKCIAKPRQTRKENGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPSPGAMNEAQDFISEICKDDQE
LQLEFGSIYTATITEIRDIGVMVKLYPNMNAVLLHNSQLDHKRIKHPTALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATVVKTMSDKQSISMGPSNSTTTNTDL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttgttgcggctggggccttcgtttgcccgcattcatgtccgtctgtgccac
cagagtgtttacaacagccatgcaaacgcgcggggagtgacagtgaaccttggggaaaag
aaactagagatttctacggggaaatttgcccgctttgctgatggatctgctgtggtacag
tttggggatacctccgtgatggcaactgctgtaagcaaaaccaagccctcgccatctcag
tttatgcctcttgtggtggactacagacaaaaagcagctgctgcaggtcgaatccccact
aactacttgagacgggagatgggcaccaccgataatgagatcctcaccagcagactaata
gacaggtcaattagaccacttttcccttctggttacttttatgacactcagatactatgt
aaccttctcgcggttgatggtgtcaatgatccagatgtgctggctatcaatgcagcttct
gctgctctggcgctgtccgacatcccttggaatggacccataggtgctgtgcgtgtgggc
atgctagacggacagttgttgatcaatcccaccagggcagagatgacttccagcactctt
aatctgattgtggctggatctcccagcagtcaagtggtgatgattgaggcatcggctgag
aatgtgcttcagcaggacttctgccatgcgctgaaggtggccgtcaaacacacgcagcag
atcatatttgccatccagcagctggtccgagaacagaatgtcaccaaacgcaccccggtt
aaggtcttctcagccccgacagacattgtgcaacatgtcagacaattagcttctgagagg
atctatgctgttttcacagattattcccatgataagatttctagagatgaagccatcaac
aaaattcgactcgaaacagaagaagagctaaaagaaaaattccctcaggctgaggctttt
gaagtcattgagtccttcaactctgtgagcagagaaatcttccgcaatttagtgctaaaa
gagtacaggaggtgtgatgggagggaactgaccgctctgaggaacatttcttgtgacgta
gacctctttaagccactccatggctcagctctctttcaaagaggacaaacacaggtgctg
tgcagcatcacatttgattccttggaatccagtatcaaagcagacattatcaccacagct
ttgagtggcatcaaggacaaaaacttcatgctacattatgagttccctccatatgcaacc
aatgaaactggaaagatgggaggaatgaacaggagagagcttggtcatggtgcactggct
gaaaaggctctgagacctgtcattcctaaagacttcccattcactattagagtaactgct
gaggtgctggagtcaaatggatcctcctcaatggcttcagcatgtagcgggagcctggca
ctaatggatgcaggtgttcccatctcctctgctgtagcaggtgttgccattggcctcatc
tctcaggccagtgaagagaaacctgctgagatccaagactacagaatactaactgatatt
ctgggaatcgaggattaccttggagacatggacttcaaactggcaggaacaagcaagggc
atcaatgctttgcaggctgatgtgaagattccaggtctgcctctgaaggtggtcatggag
gctatccaacaggccacagtggcaaagagggaaatcttaggcatcatgaacaaatgtata
gcaaagccaagacaaactagaaaagagaatggacctgttgttgaaaacgtccgggtgcca
gtgtctagacgagctcgctttgttggtccaggaggatacaacctccgcaggttacaggct
caaacaggtgtgacaataagtcaggtggatgaggagactttctctgtattcgctccatcg
ccgggagccatgaacgaagctcaagacttcatcagtgagatctgcaaagatgatcaagag
ctacagctggagtttggttctatctacacagcaacaatcacagaaataagggacattggt
gtgatggtgaaactgtatcccaacatgaacgctgtcctgctgcacaactcacaacttgac
cataaaaggatcaaacaccctactgctttggggttagaggtggggcagcagatacaggtc
aagtactttggccgagacccaacagacggcagaatgagactttcacgtaaggtgctccag
tctcctgctgcaactgtcgtgaagacaatgagtgataaacagagcatctccatgggtcca
agcaacagcaccacaaccaacactgatttgtga
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