Solea senegalensis (Senegalese sole): 122781602
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Entry
122781602 CDS
T07721
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122781602 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122781602 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122781602 (si:dkey-37o8.1)
03012 Translation factors [BR:
ssen03012
]
122781602 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
ssen04131
]
122781602 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122781602 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122781602 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122781602 (si:dkey-37o8.1)
Translation factors [BR:
ssen03012
]
Eukaryotic type
Elongation factors
122781602 (si:dkey-37o8.1)
Membrane trafficking [BR:
ssen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122781602 (si:dkey-37o8.1)
Exosome [BR:
ssen04147
]
Exosomal proteins
Proteins found in most exosomes
122781602 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
Motif
Other DBs
NCBI-GeneID:
122781602
NCBI-ProteinID:
XP_043901325
LinkDB
All DBs
Position
LG1:27752942..27755134
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AA seq
454 aa
AA seq
DB search
MGKEKTHVNVAIIGHVDSGKSTTTGHLVYKCGGIDQRRLEKFEKAAAQMGKSSFKFAWVL
DKLKAERERGITIDISLLKFNTQKYSMTIIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYESGVSRSGQTREHALLAYTLGVKQIIVCVNKMDLTEPPYSQKRFEEVARGVSGFLRK
IGYDPVTVPFVPISGWTGENMITATQKMPWFQGWKIRRREGSSSGKTLLEVLDSIQPPVR
IINKPLRLPLQDVYKIGGVGTVPVGKIETGVLKPGMTLMFSPAKLTAEVKSIEMHHQGLQ
TALPGHNVGFNIKNVSVKNLRRGDVAGNAQQDPPSDVSSFEAQVIILNHPGKVKAGYSPV
LDCHTAHVTCRFAELKEKIDRRTGKKLEDQPQVLVSGDAATVKLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVVKEQGSRPQKVCK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagagaagactcacgttaacgtggccattatcggccacgtcgacagcggcaag
tccaccaccactggacacctcgtctacaagtgtggcggcatcgatcagagacgactggag
aagtttgagaaggctgctgcacagatggggaagagttccttcaaatttgcctgggtgttg
gacaagctgaaagcagagagggagcgtggaatcaccattgacatttcactgcttaagttt
aacacccaaaagtacagcatgactataatcgatgctccaggccatcgtgacttcatcaaa
aacatgataacagggacgtctcaggctgacgttgccctcctggtggtctcagcagccaag
ggagagtatgagtctggtgtgtccagaagtggtcagaccagagagcacgccctgctggcc
tacacgctgggcgtcaagcagatcatcgtctgtgtgaacaaaatggatctgactgaaccg
ccttacagtcagaaacgctttgaagaagtggcgcgaggcgtgagcggcttcctcaggaag
attggctacgaccctgtgactgtgccctttgttccaatctctggttggaccggggagaac
atgatcactgcgactcagaagatgccttggttccaaggatggaaaatcagacggagagaa
gggagttcaagtggaaaaactctactggaagttctggactcgattcagccacctgtgcgc
atcattaacaagcctttacgattacctctgcaggatgtctacaagattggaggtgttggg
actgttccagtgggcaagattgaaacgggtgtcctcaaacccggaatgaccctgatgttc
tcacctgccaagctcacggctgaggtcaagtccattgagatgcaccaccaggggctgcag
acggctcttccaggacacaatgttggcttcaacattaagaatgtctctgtcaagaacctg
cggcgcggagacgtggcgggcaacgcacagcaggatcctccgtcagacgtcagcagcttt
gaagctcaggtgattatcctgaaccatccagggaaggtgaaagccggctactcccctgtg
ctggactgccacactgcccacgtcacctgccgctttgccgagctgaaggagaagattgac
cgtcgcacaggcaagaagctggaggaccagccacaggtgctggtgtctggagatgctgcc
actgtcaaactggttcccatcaagcccatgtgtgtggagagcttcttcacataccctccc
ttaggtcgctttgcagccagagacctgaaacagacggtggctgtgggcgtcatcaagtca
gtggtgaaggagcaaggctccagaccacagaaagtgtgtaaatag
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integrated database retrieval system
