Solea senegalensis (Senegalese sole): 122781817
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Entry
122781817 CDS
T07721
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04510
Focal adhesion
ssen04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122781817
09142 Cell motility
04810 Regulation of actin cytoskeleton
122781817
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
CH
SH3_1
SH2
SH3_2
SOS1_NGEF_PH
C1_1
SH3_9
PH
CDC24
RHG20_PH
C1_2
Filamin
L27_1
DUF7653
DUF7145
zf-RING_16
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
122781817
NCBI-ProteinID:
XP_043901792
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Position
LG1:41558320..41603717
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AA seq
868 aa
AA seq
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MEYWRQCAVWLISCKVLPVNHRVTADTAQVFDLAQTLRDGVLLCQLLNNLRPHTINLKEI
NLRPQMSQFLCLKNIRTFLTSCCDVFGMKKSDLFEAFDLFDVRDFVKVMDTLSKLSYTTI
AQQAGFKPFPTEESLKDEDIYNNLEDLIDENVLEDEDDLYTAVYGLEEDDTGGEIYEDLM
RTGQQPPQKQVELDVRSCCLAEIKQTEEKYTDTLESIEKYFLNPLKKFCSAAEIDKIFLN
IPDLVQVHKSLMVDVQDSILNKNASNLYQIFISYKERLLIYGIYCSRVEIAIAVLDLVCK
EREDVRLKLEECSKRANNGKFTLSDLLVVPMQRVLKYHLLLQELVKHTHDAVEISNLKIA
LDAMKDLAQYVNEMKRDNETLREIDQYQRSIENLNQPLISFGRPKGDGEVRVFSSIDRRK
LDRHIFLFDVAVIICKRRGDNYEMKDILDLNYFRVTDNPTSDRESKKWCYGFYVTHQQGY
TGYELFFKTRELMKKWLDQFEMAISNIRPEKANHNSHQFKMHTFERITSCSFCQLLLRGI
FNQGYLCVKCGMGAHKECLGRLGVCGRTDSARSRTKENTTPPDPGLPRMVVIRDYTGVPH
PQNGPPLSIHVGEVIEVMFADLHSSWWQGKILGTSKIGFFPSDAVRPCPCVPKPVDYSAQ
LWFAGPMERYQAEVELLDRENSTYLVRHRSKESTEYAISIKFNDKIRHIKIQTKDGCFYI
AESRLFKTLLDLVEYYKQHSLKEGFSSLDTTLQVPYRELTNGTMPMAITKAGSVPPGSCS
FVPPSSSPFWSVFSPRVVGVAVARYDFCSRDTRELSLLQGDIIKIYTKMSSGWWKGEVGG
KAGFPPHMWKKRTDFSCSETYFQRVTQS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggaggcaatgtgcagtgtggctgatcagctgcaaagtgctgccggtgaac
caccgggtgactgcggacacggcgcaggtgttcgacttggcgcagaccctgcgggacggg
gtgctgctgtgtcagctgctcaacaacctgagacctcacaccatcaacctgaaggagata
aacctccggccacagatgtcacagttcctgtgcttgaagaacatccgcacgttcctgaca
tcttgctgtgacgtgtttgggatgaagaaaagtgacttatttgaagcgtttgatctcttt
gacgtccgggacttcgtcaaggttatggacacactatcgaagctgtcgtacacaaccatt
gcacagcaagcaggattcaaaccattcccaacagaagagagcctaaaggacgaggacatt
tacaataatctggaagacttgattgatgagaatgtgcttgaggatgaggacgacttgtac
acagcagtctatgggctggaagaggacgacacaggtggagagatctatgaagatctcatg
aggactggacagcagcccccacagaagcaggtggagttagatgtacgaagctgctgcctc
gcagagatcaaacagacggaggagaaatacacggacacactggagtccatcgagaagtat
tttttaaatccgctgaagaagttctgctctgctgctgaaattgacaaaatctttctcaac
attcccgacctggttcaagttcacaagagcctaatggttgatgtgcaggactccatcttg
aacaaaaacgcttcaaacctctatcagatattcatcagttacaaagagagattgctcatc
tatgggatatactgcagccgtgtggagatcgccatcgctgttttagaccttgtttgcaaa
gagagagaggatgtccgacttaaattggaggagtgctccaagagggccaacaatgggaag
ttcacattgagcgacctgctggtcgtcccaatgcagagagtcctcaagtatcatctgctt
cttcaggagctggtcaaacacactcacgatgctgttgaaataagtaacctgaagatcgct
ctggatgccatgaaggacttggctcagtatgtcaacgagatgaagcgagataatgagaca
ctgagggagatcgaccagtaccagaggtctatcgaaaacttgaatcaacctctcatcagc
tttgggcgtccaaaaggagacggagaggtgcgcgtgttctccagcattgacaggaggaaa
ctagacagacacatctttttatttgacgtggctgtcatcatttgcaagagacgaggagac
aactatgagatgaaggacatcctcgacctcaactacttcagggtcacggacaaccccacc
tctgacagagagagtaaaaagtggtgctatgggttctatgtgactcaccagcagggctac
acaggctatgagctctttttcaagaccagagagctgatgaagaagtggctggatcagttt
gaaatggccatatcaaatatccgaccagaaaaagcaaaccacaactcgcaccagttcaag
atgcacacgtttgaaaggatcacgtcctgtagcttttgtcaactcttgctcaggggcatc
tttaatcagggttatctctgtgtgaaatgtggtatgggggctcacaaggagtgtttgggt
cgactgggagtgtgtggcagaacagattctgccaggtcaagaacaaaggaaaacacaaca
ccaccagatccaggtttacccaggatggttgtgatcagagactacactggcgtcccccac
ccacagaatgggcccccactcagcattcatgtgggggaggtcatcgaagtgatgtttgca
gacctgcacagctcctggtggcagggcaaaattctggggacgagcaagattggcttcttt
ccaagtgatgctgtgaggccttgcccatgtgttccaaaacctgtggattactctgcccag
ctctggtttgctggaccgatggaaagataccaggctgaggtggaacttctggaccgagaa
aacagcacctatctagttcgacacagaagtaaagagagcacggagtatgccataagtata
aagttcaacgataaaatcaggcacattaagattcagaccaaggatggctgcttttacatc
gctgagagtcggctgttcaagacgctgctggacttggtggagtattacaagcagcactca
ctgaaggaaggtttcagcagtcttgacaccactctccaggtcccctacagggaactgacc
aatggaaccatgccaatggccattaccaaagctggcagtgttcctcctggcagctgcagc
tttgttcctccctcctcctcgcctttctggtcagtgttttcccccagggtggtgggtgtt
gcggtggcgcgctatgacttctgctccagagacactcgagagctctcgctgctgcaggga
gacattatcaagatctacaccaagatgtccagtgggtggtggaagggagaggtcggcggc
aaggctggtttccctccacatatgtggaagaagaggactgacttttcttgctcagagact
tattttcagcgtgtcactcagagttga
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