Solea senegalensis (Senegalese sole): 122781832
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Entry
122781832 CDS
T07721
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122781832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122781832
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122781832
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122781832
NCBI-ProteinID:
XP_043901825
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Position
LG15:21137011..21174566
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AA seq
671 aa
AA seq
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MSSYTITLPGPGPWGFRMQGGKDFNMPLTISRISPGSKAAQGNLIQGDVILAIDGVSTDG
MTHLEAQNKIKMANYNLALTMTKSKRPIMMPPSRMDIGIPLIRHPQGFSPAAVAPPPPPP
AGFNPAVLKDPALSSHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDTIAGQTQVKSH
EAGGVIVKDRPVDSASLVYQAVHSADKDPDLDESGRRSINMQSKSFRVLAHITGTESASE
EKEALINSSSTEHAPTCTGSASTAPPINVQPPELAPCLPDPAPLSQHIQTPAMHQPPQAP
PPHQYQPHPQQTPPPHQYQPPPQQYQLPPQQYQPPPQQYHQPHAPPTQQSSIQIPIGSAS
SKVVSTACIYPTQPAPGPAPGPVPQPRPPVSAPAPPPPSAVTDSASGNRPPWVSDTNFAD
KFDPSKTTTTTMKVPPPLPQAAPPPPAYIPNPSPAGHPAPNPAPITPSPANFPPVARGVA
QRAERFAASSRTPLCGHCNSIIRGPFLVALGRSWHPEEFNCHYCHMSLADVSFVEEQNSV
YCENCYEEFFAPTCARCNTKVMGEVMHALRQTWHTTCFVCAACGQAFGNSLFHMEDGEPY
CEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKP
LCKKHAHAINV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatacaccatcacgctgcctggccccgggccctggggcttcaggatgcaggga
ggcaaggactttaacatgccactcaccatctccaggatcagtccaggcagtaaagcggcg
cagggaaacctgatccagggagacgtgatcctcgccatcgacggcgtgagcactgatgga
atgactcacctggaggcccagaacaagatcaagatggccaactacaacctggcgctcacc
atgaccaagtcgaagcgtccgattatgatgccaccatcgagaatggacattggcattccc
ctcatccgacacccacagggtttctctcctgctgctgttgctcctcctcctcctcctcct
gccggcttcaaccccgctgtgctgaaagaccccgccctctcctcccataagcccattgag
gtgaagggtccgggcggtaaagccaccatcatccacgcccagtacaacacgcccatcagc
atgtactcacaggacgccattatggacaccatcgctggacagacacaggtcaagagtcat
gaggctggcggtgtcatagttaaagatcgtcctgtagacagcgcctccctcgtctatcag
gccgtccacagcgcagacaaggacccggatctggacgagagtggacgccgcagcatcaac
atgcagtccaagtccttccgggtcctggctcacatcactggaaccgagtccgcatcagag
gagaaggaggcgctgataaacagcagctctactgagcatgctccaacatgtactggctcc
gcctccactgcaccgcccattaatgtgcagcctccggaactcgccccctgtttgcccgac
cccgcccctctcagtcagcacattcaaactcctgccatgcaccagccaccacaggccccg
cctccacatcagtaccagccacacccacaacagaccccacctccacatcagtaccagcca
cccccacaacagtaccagctgcccccccaacagtatcaacctcctccacagcagtaccat
cagccacatgccccgcccactcagcagagttccattcagatcccaattggctccgcctct
tcgaaggtggtgagcaccgcctgcatctaccccacccaacctgctccaggtccggctcca
ggtccagtgcctcagccccgcccaccagtttctgccccagccccgccccctccctctgct
gtcactgactccgcctctggaaaccgaccgccgtgggtgagcgacacaaactttgcagat
aaattcgaccccagtaaaaccaccaccaccaccatgaaggtgccgccgccactaccccag
gccgcaccccctccaccggcttacatccccaacccctcccccgctgggcaccccgctcct
aaccccgcccccatcactcccagccctgccaacttccctcctgtggcgaggggcgtggct
cagagggcagagagattcgctgccagcagccgcacacctctgtgcggacactgcaacagc
atcatcagaggaccgttcctggtggcgctcggtcgttcgtggcacccggaagagtttaac
tgtcactactgtcacatgtcactggctgacgtcagcttcgtggaggagcagaacagcgtt
tactgtgagaactgctacgaggagttcttcgccccgacctgcgctcgctgtaacaccaag
gtcatgggggaagtgatgcacgctctgcgccagacgtggcacacgacctgcttcgtgtgc
gctgcctgtggacaagccttcggaaacagtctcttccacatggaggacggggagccgtac
tgtgagaaagattacgtcgccctcttcagcactaagtgtcacggctgtgactttcctgtg
gaagctggtgataagttcatcgaggctctgggtcacacctggcacgacacctgcttcatc
tgcgccgtgtgtcacgtgaacctggagggtcaacctttctactcaaagaaagacaaacct
ctgtgtaagaaacacgctcacgccatcaacgtgtaa
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