KEGG   Solea senegalensis (Senegalese sole): 122781846
Entry
122781846         CDS       T07721                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03010  Ribosome
ssen04120  Ubiquitin mediated proteolysis
ssen04137  Mitophagy - animal
ssen04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    122781846
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122781846
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122781846
   04137 Mitophagy - animal
    122781846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ssen03011]
    122781846
   04121 Ubiquitin system [BR:ssen04121]
    122781846
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssen04147]
    122781846
Ribosome [BR:ssen03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    122781846
  Archaea
    122781846
Ubiquitin system [BR:ssen04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122781846
Exosome [BR:ssen04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122781846
  Exosomal proteins of colorectal cancer cells
   122781846
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 122781846
NCBI-ProteinID: XP_043901845
LinkDB
Position
LG15:complement(21214196..21217376)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagaccataaccctcgaggtcgaaccctcg
gacacgatcgaaaatgtcaaagctaaaatccaggacaaggagggaattcctcctgaccag
cagaggctgatcttcgctggaaagcagctggaagacggacgcacgctgtccgactacaac
atccagaaggagtcaactctgcacctggtgctgaggctgaggggtggagccaaaaagagg
aagaagaagtcgtacaccacgcccaagaagaacaagcacaagaggaagaaggtcaaactc
gctgtgctcaagtattacaaggtggacgagaacggtaaaatccaccgtctgcggcgtgag
tgtccggctgacgagtgcggcgccggcgtcttcatggcgagtcactttgaccgtcactac
tgcgggaagtgctgcctcacttactgcttcaacaaacctgaggacaaataa

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