Solea senegalensis (Senegalese sole): 122781875
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Entry
122781875 CDS
T07721
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122781875 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122781875 (ercc6)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122781875 (ercc6)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122781875 (ercc6)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122781875 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
122781875
NCBI-ProteinID:
XP_043901879
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All DBs
Position
LG15:7370089..7385056
Genome browser
AA seq
1444 aa
AA seq
DB search
MPVEGSEDQIPSSFSSPASAALTPGGTEEDGAAGGSGGCSLPETTQGSEAAAAYPANTGP
AESNSAGKKSGALLQINRQRIQAASASSGADELQGLGVAVYDHDILEQGVLQQVDEAIQE
ASDAAAKAEAAKEYQSVLDDVRSVTLSLKQVNKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQKRLQAILGGEDTQRVEAELLAEDDEEEEEAGPSTLGSMLMPAQETEW
EELIRKGHMTPFGTRIPQKEAKKEPRKVMLVENSAFDQYLNDQAKLATERKKVPPLKKKR
PSGLSPDKGSMVKTKRYISSPKDKKLKKRMRKLQITALKAHPKARAKVEPQLSKPKRKLH
TEGGETESDGSEYLPSDEVVDPDEEDREAMEEGFGEEDDEDYELKPYKRKTEGRTKKKGK
KKQDSEEEYCPESSDEEEGPKGKQMRCKDDGDVEYYRQRIRRWKRQRLQEREEKRQRGEE
LTDDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQVIS
FLAGLSYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFT
SNKEKLIPEIASCHGILITSYSAVRNMQDTLQRYDWHYIILDEGHKIRNPNAGVTTACKQ
FRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
QTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQGFLDSKE
VYQILNGDMQVFSGLIALRKICNHPDLFSGGPKILKGIQEDQLTEEEHFGFWKRSGKLIV
VESLLRLWFKQNHRVLLFTQSRQMLHILEVFVRENNYTYLKMDGTTTIASRQPLIARYNE
DKSIFIFLLTTKVGGLGVNLTGANRVILYDPDWNPSTDTQARERAWRIGQTQQVTIYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLTDPDGSQGTETSAIFA
GTGSDVKAPKKTERPKPSHTLNHAHKHSSATWSESGADSRHSSANMTALRDGNPSLCSTS
SQGKLNVPAGSQSTNQNAVDVNPNISTYMQRTGQNNREWGAAKAAVKNSNSTRDSALTSP
QKHREKRKHCDSANKHKHKHKKHKRSHDARFEGQRISHLVKKKTFNKAENEDNGTGEEKK
SDDYVLAKLFKKSGIHSVMQHDSIIESSNPDYVLVEAEANRVAKDALKALKVSRQRCRQS
FSRPPPPPARKRFGQKKNSLLAAPSVQSAPLPTKCKDAAVVKKSVSKKPGSGALFSGECT
ESGSNSTPLSSSSLLAKIRARNHLSMPSCQREEEEDEDVSAAPGRSSPPAPPTQHDELLV
DLRNFVAFQANVDGQATTQEVLGYFQPRLTKEQAPVFRELLRSICDFHRTSGQEGMWRLK
EHFH
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagagggttcagaggaccagataccctcctcattctccagcccagccagtgct
gccctcaccccaggagggacagaggaggatggagctgcaggaggatcaggaggctgctct
ttacctgaaaccactcagggctctgaggctgctgcagcctatcctgccaacactggaccc
gcagaaagcaacagtgctggcaagaaatctggggccttgttgcagatcaaccgacagcgt
atccaagcagctagtgccagctcaggagcagatgaacttcaaggccttggtgttgctgtg
tatgatcatgacatccttgagcaaggtgtcctgcagcaggtggatgaggcaatacaggag
gccagtgatgctgctgctaaagctgaggctgcgaaggagtaccagtctgtgctcgatgat
gtcagatctgttacattatctctgaaacaagttaacaagattattgaacagctatctccc
tacgctgcttccagcaaagatatcagtagaaagattgaatctgtcaaacgacagaaagaa
aataaggaaaaacagctgaagaaagttagagccaaacagaagcgacttcaggccattctt
ggaggagaggacacccaaagggttgaagctgagcttttggctgaggatgatgaagaagag
gaagaagctgggccgtccactctgggcagcatgctcatgccagctcaggagacagaatgg
gaggagcttatccggaaaggtcacatgactccttttggaacccgaatccctcagaaagag
gcaaagaaggagcctcggaaagtgatgcttgttgagaattcggcctttgaccagtacctg
aatgaccaggccaagttggctacggagaggaagaaagttcctcctttaaagaagaagagg
ccctcgggactcagtcctgacaagggatccatggtaaaaaccaaaagatatatttcttct
cccaaggataaaaaattaaagaagcgtatgcggaagctccagataactgctctgaaggct
catcccaaagctcgggctaaggttgagcctcaactctctaaaccaaagaggaagcttcat
acagagggaggggagactgaaagtgatgggtcagagtatctgccctctgatgaagttgta
gatcctgatgaagaggacagagaagccatggaggaggggtttggggaggaggatgatgaa
gactatgagttaaaaccgtacaaaagaaaaactgaagggagaacgaagaagaaaggcaag
aaaaagcaggacagtgaggaagaatactgccccgagagttcagatgaagaggagggtccg
aaaggtaaacagatgagatgcaaagacgatggagacgtggaatactacagacagcgaata
aggagatggaagcgacaacgtcttcaagaaagggaggagaagaggcaaagaggtgaggag
ctcacggatgacagtgatgcagagtttgatgaaggcttcaaagtgcccggattcctgtgg
aaaaaactttacaagtaccagcagacaggtgtgcggtggctgtgggaacttcactgtcag
caggcaggtggcatcctgggagatgagatgggattgggtaaaaccatccaggtcatcagc
tttctggctggactgagctacagcaaactgaggaccagaggatccaactacaggtacgtt
ggtcttggacctacagtcattgtgtgcccagctacagtcatgcaccagtgggtgaaggag
tttcacacctggtggccacctttcagagtagctgttctacatgaaactggctccttcacc
agcaataaggaaaagctcattccagagatagcatcatgtcacggaatcctaattacctca
tattcagctgtgagaaatatgcaagacaccttacagcgatacgactggcactacattata
ctggatgagggccataaaatcaggaatccaaatgctggggttaccactgcttgcaaacag
tttcgcactccccacaggttcatcctgtcgggctctcccatgcagaacaatttaaaggag
ctgtggtctctgtttgactttgtcttccccggcaaactggggacattacctgtgttcatg
gagcagttttctgtgccaatcaccatgggaggatacagcaatgcttcacctgtgcaggtc
cagacagcgtttaagtgtgcatgtgtgctgagggacaccataaatccttacctgctcaga
aggatgaaggcagacgtcaaggccaatctctccttacctgacaaaaatgaacaggtcttg
ttttgcagattaacagaagatcagcggcaggtgtatcagggcttcttggattccaaagag
gtctaccagatactaaatggagacatgcaggtattttcaggcttgatagcactccgtaag
atctgtaaccaccccgaccttttctcgggcggccccaagatactgaagggaatccaagag
gaccagctgactgaggaggaacactttgggttttggaaacgctcagggaaacttatagtg
gtggagtcactgctgcgtctctggttcaaacagaaccacagagtcctgctcttcactcag
tcaagacagatgttgcacatcttggaggtgtttgtgagggagaataactacacgtacctg
aaaatggacggcactaccacgatagcttcccgacagccgctcatagctcgctacaacgag
gataaatccatatttattttcttgttgaccactaaagttggaggtctgggagtcaatctg
acaggagccaaccgagtcatcctctatgacccagactggaaccccagcactgacacacag
gcaagagagagagcgtggagaattggtcagacacagcaagtgacaatttacagactgctg
actgcagggaccattgaggagaaaatctaccacaggcaaatcttcaaacagtttctgacc
aatcgtgttctgaaggaccccaaacaaagacggttctttaaatcaaacgacatctatgaa
ctcttcaccctgactgaccccgatggatctcagggaacagagaccagcgccatatttgca
ggtacaggttctgatgtcaaggcacctaagaaaacagagagaccaaagccatcacacaca
ttgaaccatgcacataaacactcctcagctacctggagtgaaagcggtgcagacagcaga
cactcctcagctaacatgactgcactaagggatggaaatccctctctgtgcagtacaagc
tctcagggtaaactgaatgtcccggcaggaagtcaaagcaccaaccagaatgctgtggat
gtaaacccaaatatctcaacatatatgcagcgcacaggacaaaataatagagagtggggt
gcagccaaagcagccgtcaagaactcaaactctaccagagactctgctttgactagtccg
cagaaacacagggagaagaggaagcactgtgactccgccaacaaacacaaacacaagcat
aagaaacacaaacgatctcatgacgctcggtttgaaggccaacgcatctctcacttggtg
aagaaaaagaccttcaataaagcagagaatgaagacaatggtacaggagaggagaagaaa
tcggacgattatgtcttagcgaagctcttcaagaaatctgggatccacagtgtaatgcag
catgactccatcatcgagtcctctaaccccgactacgttcttgtggaggcagaagccaac
agggtggccaaagatgccctgaaagctcttaaggtttctcgccagcgatgtagacagtcc
ttcagtagaccgcctcctccacctgcgagaaaacggtttggtcaaaagaagaattctctt
ctggctgcaccctctgtgcagtctgcccctctgcccactaaatgcaaggatgctgctgtc
gtaaaaaaatcagtgtcaaagaagcctggttcaggagctctcttcagtggggagtgtaca
gagagcggctcaaactccaccccactctcctcctcctccctgctggccaagattagagcc
cgcaatcacctcagtatgccctcgtgccaaagagaagaagaggaagacgaggatgtgtcc
gccgctccgggaaggagctcccctccagctccgcccacccagcatgacgagctgctggtc
gatctgcgcaactttgtagccttccaggcgaacgtggacggacaggctacgactcaggag
gtgctggggtatttccaaccacgtctcaccaaggaacaggctcctgtcttcagagagctg
ctcaggagcatctgtgacttccataggacttcaggtcaggagggaatgtggaggttgaag
gagcatttccactga
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