Solea senegalensis (Senegalese sole): 122781999
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Entry
122781999 CDS
T07721
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122781999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122781999
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122781999
03012 Translation factors [BR:
ssen03012
]
122781999
04131 Membrane trafficking [BR:
ssen04131
]
122781999
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122781999
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122781999
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122781999
Translation factors [BR:
ssen03012
]
Eukaryotic type
Elongation factors
122781999
Membrane trafficking [BR:
ssen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122781999
Exosome [BR:
ssen04147
]
Exosomal proteins
Proteins found in most exosomes
122781999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
122781999
NCBI-ProteinID:
XP_043902097
LinkDB
All DBs
Position
LG15:17299217..17306836
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMNWFKGWKITRKEGNASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALT
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKVSTTGKITKSAQKAQRNK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaaacttcacatcaacatcgtagtgatcggccacgtggactctggcaag
tccaccaccacgggccacctcatctacaagtgcggcggcatcgacaagaggaccatcgag
aagtttgaaaaggaagctgctgagatggggaagggatcgttcaaatacgcctgggtgctg
gacaagctgaaggccgaaagagagcgcggcatcaccatcgacatctcgctgtggaaattt
gaaaccagcaagtactatgtgaccatcatcgatgccccgggtcacagagactttatcaag
aacatgatcaccgggacctcacaggcagattgtgccgtgctgattgtcgcagctggcgtc
ggggagttcgaggcggggatttccaagaacggtcagacccgtgagcacgccctgctggcc
tacacgctgggagtaaagcagctcatcgtgggcatcaacaagatggactccaccgagcca
aactacagtcagaagcgctacgaggaaatcgtgaaggaagtgagcacgtacatcaagaag
attggctacaatccagacaccgttgcctttgtgcccatttcaggctggaacggagacaac
atgcttgagcccagtcccaatatgaattggtttaagggctggaagatcaccaggaaagaa
ggcaacgcatcaggcaccactctcctggaggctctggatgctattcagcctcccacccgt
ccaacagacaaacctctgcgtctgcccctgcaggacgtctacaagattggaggtattggg
actgtgccagtgggccgcgtggagaccggaatcctcaagcctggcatggtcgtgacgttt
gcccccgtcaatgtgaccactgaggtgaagtctgtggagatgcaccatgaggccctgact
gaagcgctgcccggcgacaacgtgggctttaatgtcaagaacgtgtcagtcaaggacatc
cgccgtggcaacgttgccggagacagcaagaacgacccaccacaggaagctgccaacttc
actgcccaggtgatcatcctgaaccacccaggccagatcagtgctggttatgctcctgtc
ctggactgccacactgctcacatcgcctgcaagtttgccgagctgaaggagaagatcgac
cgccgctctggcaagaagctggaggacaaccctaaagccctcaagtctggagatgcggcc
atcgtggacatggttcctggcaagccgatgtgcgtggagagcttctccgagtaccctccg
ctgggtcgtttcgcggtgcgtgacatgcgtcaaacggtggctgtgggtgtgattaaggcc
gtggagaagaaggtctccaccactggtaaaatcaccaagtccgcccagaaggcccagagg
aacaaatga
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