Solea senegalensis (Senegalese sole): 122782251
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Entry
122782251 CDS
T07721
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122782251 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122782251 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122782251 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Rad9
Motif
Other DBs
NCBI-GeneID:
122782251
NCBI-ProteinID:
XP_043902470
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All DBs
Position
LG15:complement(12320870..12327048)
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AA seq
322 aa
AA seq
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MPVRVVMQGPGPWGFRLVGGKDFEQPLAVSRVSPGSKAAQANLCIGDIILAIDGESAENM
THLEAQNKIKGCIDEMVLSIDRSEAKLWSPLSCKEGKTHPYKMNLESEPQEVKHIGSTHN
RSALPFAGFGPKVVTNQYNSPSGLYSSENIKNFNSAVDEVKTIATANEATSKSPSDPSKM
NKRPPVTADSEVYKMLQENQESDEPPRQSASFMVLQEILETGDPDKPSGFRSVKAPTTKI
GSSVGGVEKLPICDKCGSGIVGIVVKLRDKFRHPECYTCTDCETNLKQKGHFFVEDQIYC
EKHARERTTPPEGYEVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcgggtggtgatgcagggtcccggaccctggggattcaggctggttggggga
aaggactttgagcagccgctggctgtttcccgggtctcccctgggagtaaagcagctcag
gccaatctttgtatcggagacatcattttggctatcgacggagagtcagcagaaaacatg
actcacttggaagcacagaacaagattaagggctgtatagatgagatggtgctctccata
gacaggtcggaagctaaattgtggtcgccactttcatgcaaggaggggaagacgcatcca
tacaagatgaatcttgaatcagagcctcaggaggtgaaacacattgggtccacccacaac
aggagtgccctgccgtttgctggttttggccctaaagttgtgaccaaccagtacaacagt
ccctctggtctgtactcttcagagaacatcaagaacttcaactcggctgtggacgaggtg
aagaccatcgctacagccaatgaagccaccagcaaatctccttcagatccgtcaaaaatg
aacaagcggccgcctgtgactgcagattcagaggtctacaagatgctacaggaaaaccaa
gagtccgatgagcctccacgacagtcggcttctttcatggtgcttcaggagatccttgag
actggtgaccctgataaaccttcagggttcaggagtgtgaaggcacccacgacaaagatc
ggctcatcagtggggggtgtagagaagttacccatctgtgacaaatgtggatctgggatt
gtggggattgtggtgaagctgagggacaagttccgtcaccccgagtgctacacctgcaca
gactgcgaaaccaacctaaaacagaagggacatttctttgtggaggaccagatttactgt
gagaagcatgcacgggagcgaacaactccgcctgagggctacgaagtggtcactgtcttc
cccaagtag
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