KEGG   Solea senegalensis (Senegalese sole): 122782251
Entry
122782251         CDS       T07721                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122782251 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ssen04990]
    122782251 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:ssen04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   122782251 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2 Arc_trans_TRASH Rad9
Other DBs
NCBI-GeneID: 122782251
NCBI-ProteinID: XP_043902470
LinkDB
Position
LG15:complement(12320870..12327048)
AA seq 322 aa
MPVRVVMQGPGPWGFRLVGGKDFEQPLAVSRVSPGSKAAQANLCIGDIILAIDGESAENM
THLEAQNKIKGCIDEMVLSIDRSEAKLWSPLSCKEGKTHPYKMNLESEPQEVKHIGSTHN
RSALPFAGFGPKVVTNQYNSPSGLYSSENIKNFNSAVDEVKTIATANEATSKSPSDPSKM
NKRPPVTADSEVYKMLQENQESDEPPRQSASFMVLQEILETGDPDKPSGFRSVKAPTTKI
GSSVGGVEKLPICDKCGSGIVGIVVKLRDKFRHPECYTCTDCETNLKQKGHFFVEDQIYC
EKHARERTTPPEGYEVVTVFPK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgcctgtgcgggtggtgatgcagggtcccggaccctggggattcaggctggttggggga
aaggactttgagcagccgctggctgtttcccgggtctcccctgggagtaaagcagctcag
gccaatctttgtatcggagacatcattttggctatcgacggagagtcagcagaaaacatg
actcacttggaagcacagaacaagattaagggctgtatagatgagatggtgctctccata
gacaggtcggaagctaaattgtggtcgccactttcatgcaaggaggggaagacgcatcca
tacaagatgaatcttgaatcagagcctcaggaggtgaaacacattgggtccacccacaac
aggagtgccctgccgtttgctggttttggccctaaagttgtgaccaaccagtacaacagt
ccctctggtctgtactcttcagagaacatcaagaacttcaactcggctgtggacgaggtg
aagaccatcgctacagccaatgaagccaccagcaaatctccttcagatccgtcaaaaatg
aacaagcggccgcctgtgactgcagattcagaggtctacaagatgctacaggaaaaccaa
gagtccgatgagcctccacgacagtcggcttctttcatggtgcttcaggagatccttgag
actggtgaccctgataaaccttcagggttcaggagtgtgaaggcacccacgacaaagatc
ggctcatcagtggggggtgtagagaagttacccatctgtgacaaatgtggatctgggatt
gtggggattgtggtgaagctgagggacaagttccgtcaccccgagtgctacacctgcaca
gactgcgaaaccaacctaaaacagaagggacatttctttgtggaggaccagatttactgt
gagaagcatgcacgggagcgaacaactccgcctgagggctacgaagtggtcactgtcttc
cccaagtag

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