Solea senegalensis (Senegalese sole): 122782308
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Entry
122782308 CDS
T07721
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssen03037
]
122782308 (nphp3)
Cilium and associated proteins [BR:
ssen03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
122782308 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
TPR_10
NPHP3_hel
NPHP3
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_19
NACHT
AAA_16
TPR_11
TPR_6
KAP_NTPase
ATPase_2
AAA_22
AAA_14
AAA
AAA_19
ARM_TT21_4th
DUF4635
XRCC4_CC
Macoilin
Motif
Other DBs
NCBI-GeneID:
122782308
NCBI-ProteinID:
XP_043902580
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Position
LG1:30115227..30146890
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AA seq
1302 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDPHDSDSDDNQTTVTAAGTQCDYWTGGALGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVATLLQVSPHVPQALWSNTVRCYLIFTQETKAELDIFIKKHSS
VLRKMCEGLGHFYLNVCFPEETAASYVVERKQELERSSVCVLLLKSTVSSSAVEDCEEAF
VKNPDGHPLVLYLRTDEDHSLTGPTRQLLERVNAADKAGKIKVVDHSGSAEDGADLIHAQ
LERVIRQELLGLEGADVESKDSGIEEGREEDSGDVLWDLHDEQDQIESYQQACGSTTSQL
GFQRYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKQTPNTLFLYHFVGRP
LSTSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDS
IDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSVVNAE
CQTIDFKLTKDQEKKLERHCRSASTCNALYVTLLARMIISSWSCWSQEKSMEQFLQCPDT
MSLYRLALKMALSSLNNDRERLVMREILCLVCASHNGVSESEVLDLFPELEVPVLSSMLY
HLNRLCIVTLRCGLVRFQHLQAWEAVRLEFLGGGSSSATYREKLIHYFSQQLSQDCVTWR
VADELPWLLQQQEDRTNLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSCMASEYFD
SLKHYEKSCESEESMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAGVYVQWKKYGNAEQLYKQAMEISENAYGAEHASVARELESLAMLYQKQNKYE
QAERLRKRSVKIRQKTARQKGHMYGFTLLRRKTLQLEELTLGKDSADCAKTLNELGVLYY
LQKNLDAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDI
RKKALSPDHPSLAYTLKHLAMLYKRRGRLEKAVPLYELSLEIREKSFGPKHPSVATALVN
LAVIYCQMKKHSEALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEKGDFERAAELY
KRAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPPPHAPR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctctggtcagcccaggagaagtgattgaggatggatatgggggt
gaaggtggggaagcctgtgagatcccagtggaggtcaagcccaaagcccgactcctacgc
agctcctttcgcagaggaccacgggtgatcggggccagtttcaagtccacgggttcagtg
gacctggagtacgctgcggagtacgagagactccggaaggagtatgaaatctttcgtgtc
agcaagaataacgaaatatcatccatgcaaaagaaggaagccaaactggatgaggagaac
aagaggttaagagctgaactgcaggctctgcagaaaacttaccagaagatccttcgagaa
aaagagagtgctcttgaggcgaagtaccaagctatggagagggctgctacttttgaacat
gacagagacaaagtgaaacgacagtttaagattttccgtgagacgaaagaaaaggagatt
caggatctcctccgagccaaaagggacctagaggccaaactgcagcagctgcaggctcag
ggaatccaagtctatgacccgcatgattctgactcagatgacaaccagaccactgttacc
gctgcaggaacacagtgtgactactggactggtggtgcgctgggaagtgagccctctatg
ggcagtatgatgcagttgcagcagactttccgaggaccagagtttgctcacagtctgatt
gatgtggagggaccgtttgcaaatgtgagcagagatgactgggatgctgcagtagccacc
ttacttcaggtctcccctcacgtgccccaggccttatggagtaacacagtacgctgctac
ttaatctttactcaggagaccaaagctgagttggatatctttattaagaaacactcctct
gtgttacggaagatgtgtgagggtctgggccatttctacctgaacgtctgcttcccagag
gaaactgctgcctcatatgttgtggagcgcaagcaggagcttgaacgaagctccgtgtgt
gtgcttctcctcaaatctactgtctccagctctgcggtggaggattgtgaggaggcgttt
gtgaagaatccagatggtcatccactggtactctacctcagaactgacgaagatcacagt
ttgactggacccaccaggcaactgctggaaagggtcaatgctgcggacaaggctggtaaa
atcaaggtggtggatcacagtggatccgcagaagatggagctgacctaattcatgctcag
ctagagagagtcatcagacaggagttgctgggtcttgaaggagcagatgtggaatccaag
gactctgggatagaggaggggcgtgaggaagactctggagatgtcctgtgggacctgcac
gatgaacaggatcagattgagtcctatcagcaagcctgtggcagcaccacctctcagctg
ggtttccagaggtatatagatcgtttgaatgacatgatcgctgctccccctcccacccct
cctctgctggtgtctggtggtccaggctcaggaaaatctctcctgctttccaaatggatt
gagctgcagcagaagcagacgcccaacactttgtttctgtatcattttgttggtcgtcct
ctttccacaagttcagagcctgttctcataatcaaacgccttacagtcaaactgctgcag
catttctggtccatttccggcttgtctatggaacccagtaagatcttggaggaatttccc
cgctggcttgaaaggctttccgcacgtcaccaaggaaacatcatcatcatcatcgactcc
atcgaccaaatacaacaagcggaaaggcacatgaagtggctgatcgaccccctgcctgtt
aatgtgagagtggtggtgtcagtcaatgttgagacgtgtcctcaggcttggaggttgtgg
cccacgctccacttagacccactaagtcccagagaggttaggagtgttgtcaatgcagaa
tgtcagactattgacttcaagcttaccaaggaccaggagaagaagctggagaggcactgt
cgctctgcgtccacatgcaatgccctgtatgtcacactcttggcaaggatgatcatcagc
agctggtcatgttggtcacaggagaagagcatggagcagtttctgcagtgtccagacacc
atgtcactctaccgtctggcactgaagatggcgttgagctcccttaacaacgacagagag
cgacttgtaatgagagagatactgtgccttgtatgtgcaagccataatggagtgagtgaa
tctgaggtcctggaccttttcccagagcttgaggtacctgtcctgtcctctatgctgtac
cacctgaacagactctgcattgtaactctccgttgcgggcttgtcaggttccaacacctg
caggcttgggaagctgtgaggttggagttccttggtggaggaagcagctctgctacttat
agagagaaacttatccattatttcagccaacaactcagccaggactgtgtgacgtggcgt
gttgcagacgaacttccctggttgctccaacagcaagaggacaggacgaatcttcagctc
agccttttgaacctgtttgtgtcccaaaatctctacaagaggggtcatttctctgagctg
ctggcctattggcagtacgtaggtaaagacaaaagctgcatggccagtgagtactttgac
tctctgaaacactatgagaaaagctgtgagagtgaagagagcatgaccaagttggccaac
ctgtatgagaccttgggacgtttcctcaaagacctgggtcttccaagtcaggctgtagcc
cctttacaaaggtcccttgaaatcagggagacggccctggatccggaccatcccagcgtg
gcccgctccctacaccagctggccggggtttatgtgcagtggaagaagtacggcaacgct
gagcagctgtataagcaggccatggagataagtgagaacgcctatggtgccgagcacgcc
agtgtggcacgagagctggagtccctcgccatgctctatcagaaacaaaataagtatgaa
caagcagagagactccgcaagaggtcggtgaagattcgtcagaaaactgctcgccagaaa
gggcatatgtatggcttcactttgttgcgacgcaaaactctgcagctggaagagctgacg
ctggggaaagactctgcagactgtgccaagaccctgaatgagctgggggtcctgtactac
ctccagaaaaacctggatgcagccaaggtgtttttgacccgctccctggagatgcgtcag
cgagtcctcggtcctgatcacccagactgtgctcagtctctcaacaacttggccgcacta
cacactgagaggagggagtacgagactgccgaggacatgtatgagagggcgctggacatt
cgcaagaaggccctatctccagaccacccttcgctggcgtacacactcaagcacctggcc
atgctgtataaacgcagaggaaggctggagaaggctgtgccactgtatgagctgtcccta
gaaataagggaaaagagttttgggcccaaacatcccagtgtggccacagcactggtcaac
ttggctgtaatatactgccaaatgaagaaacacagtgaagctttacctttgtatgaacga
gcgctgaaagtgtatgaggacagtttaggacgctcacatccacgagttggagagaccctt
aaaaatctggctgtgcttagctatgaaaagggtgactttgaaagagcagcggagctttac
aagcgggcgatggagattaaagaggcggagccatcgcttgtatgtggaaatgcaccgtcc
cgccattcctccagtggggatacgtttagtctcaggggacctgctcctcccccacatgcc
ccaaggtga
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