Solea senegalensis (Senegalese sole): 122782663
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Entry
122782663 CDS
T07721
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04137
Mitophagy - animal
ssen04140
Autophagy - animal
ssen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122782663 (hif1aa)
04137 Mitophagy - animal
122782663 (hif1aa)
04148 Efferocytosis
122782663 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122782663 (hif1aa)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122782663 (hif1aa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
122782663
NCBI-ProteinID:
XP_043903031
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Position
LG16:complement(4706852..4720422)
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AA seq
768 aa
AA seq
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MDTGIVPEKKRVTSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSISSSLDKASIMR
LAISYLRIRQLLSPDEPVAEEETELDMQLNSSYLKALDGFLMVLSEDGDIVYLSENVNKC
LGMAQFDLTGHSVFDFTHPCDQEELREMLIHRTGSKKNKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYETQTEKTNENTEPPVPHLVLICDPIPHPSNIEVPLDTKT
FLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQVS
TGQYRMLAKSGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKMILSLEQTTDMK
PVKKEEQKQEPVLELEEEEAVVVDSSLPDMSPTLLKEEEDEEDEEKEDNVPELDVIKLFT
QAAETKPSLYDQLKGEPEALTLLAPAAGDTIISLDFSCPDSEIQLLSDVPLYNGVMLPSP
GDKLALSLSPLPSSEPLCLAAASDESKPKSFAPAPSSAAASHSATETVTPLGFCLPMDSD
MSSDFKLDLVEKLFAIDTEPKSPFTTQEMEDLDLEMLAPYIPMDDDFQLRSLTPDEPLSL
KSSPVHITQDVSSYPSSPFSSLSSRTASPSPPESVNSPATSIAKITPHLDKEVSLRTLAT
QNIQRKRKLCDLKEMTEQRSLLHEQLDQGKKLKAANLGSTTTNTTTTTILLLPSDVASRL
LGTTSEGSGSLFSLPQLTRYDCEVNAPVQGRQYLLQGQELLRALDHIN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagagtgacctcggagcggaggaaggagaag
tcgagggatgcggcgcgatgccgccgtgggaaggagtcggaggtgttctacgagctggcc
cagcagctgcctctgccccacagcatcagctccagcctggacaaagcctccatcatgagg
ctcgccatcagctacctgcgcattaggcagctgctcagccctgatgaaccagtggcagaa
gaggagacagagctggacatgcagctcaacagctcctaccttaaggctctggatggcttc
cttatggtgctgtctgaagatggagatatcgtttatctctctgagaatgtcaacaaatgc
cttgggatggcacagtttgacctgactggacacagcgtgtttgacttcacacatccctgt
gaccaggaggagctgcgagagatgctcatccacagaacaggctccaagaagaacaaggaa
ccaaacaccgagcgcagctttttcctccgcatgaaatgtactctgacaagcaggggccgc
actgtcaatgtcaagtcggctacatggaaggttctccactgctctggtcatgttcgtgtg
tatgaaacccagactgaaaagaccaacgagaacacggagcctcccgtcccccacctggtt
ttgatctgtgaccccattccccacccttccaacatcgaggtccctctggacaccaagacc
ttcctcagccgccacacgatggacatgaagttcacgtattgtgatgagaggatcactgag
ctcatgggttatgatccagaggacttactgaatcgttccgtgtatgagtactatcatgct
ctggactctgaccaccttactaagactcaccataacctgtttgcaaagggccaggtgagc
acaggacagtaccgtatgttggccaagagcggaggctttgtgtgggtggaaactcaggcc
actgtcatctacaacaacaagaactcccaaccacagtgtgttgtctgcgtcaactttgtg
ctcagtggcatccaggaggagaaaatgatcttgtcactggagcagactacagatatgaag
cctgtgaagaaggaggagcagaaacaggaaccggtgctggagctggaggaagaagaggct
gttgtggtggacagcagcctgcctgacatgtccccaaccctgctgaaggaggaggaggac
gaggaggacgaggagaaggaggacaacgtccctgaactggacgtgatcaaactatttact
caggctgcagagaccaagccaagcttgtatgaccagctgaaaggggagcccgaggccctc
accctgctggccccggctgctggagacacaatcatctccctggacttcagctgccctgat
tcagagattcagctgctgagcgacgtccctctctacaacggcgtaatgctgccctccccg
ggtgacaaactggctctgtctctttcgcccctgccatccagcgagcctctctgtctcgcc
gccgcctctgatgagtcaaaacccaagagctttgctccagctccatcctctgcagcagcc
agccatagcgccacagagactgtcactccattgggcttttgtttacccatggactccgat
atgagctcagacttcaaacttgacttggtggagaagctttttgccattgatacagagccc
aagagcccatttaccacacaggagatggaagatttggacctggagatgctggctccctac
atccccatggatgacgactttcagctgcgcagtctgaccccggatgagcctctgtccctc
aagagttctccggtccacatcacacaggacgtcagcagctatcccagctccccattcagt
tcactgagcagtcgcactgcttccccatctccacccgagtctgtgaactcccctgctacc
agcattgccaaaataaccccacatttggacaaagaagtctcactcaggactctggctact
cagaacatacagcgcaaaagaaaactttgtgacctaaaagagatgactgaacagagaagt
ttgcttcatgagcaactggaccagggcaaaaagctgaaagctgccaatttgggatcaacc
accaccaacaccaccaccaccaccatactcctgctgccttcagatgtggcgagtcgtctg
ctcggcaccacttcagaaggcagcggttctcttttctccctgccacagctcacccgctac
gactgcgaggttaacgcccccgtgcagggccgccagtacctgctgcaggggcaggagctg
ctgcgcgcactggaccatattaactga
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