Solea senegalensis (Senegalese sole): 122782819
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Entry
122782819 CDS
T07721
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122782819 (brf1a)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122782819 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
122782819
NCBI-ProteinID:
XP_043903295
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All DBs
Position
LG16:complement(1444585..1501896)
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AA seq
695 aa
AA seq
DB search
MSPKACKNCGSSDVDVDQARGDAVCMGCGSVLEDNIIVSEVEFVESGGGGSLAVGQFVSS
EGNKNPVFGEGHHGIGSESRAQTLQRAKQHINTLGRQLQMNQHCLDTAYNFYRMALGKHL
TRGRKASHVIAACLYLVCRTEGTPHMLLDFSDVLQVNVYVLGRTFLVLSRELCINASAID
PCLYIPRFAQKLEFGEKNHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMYDF
CRTTKEIVKVVKVCESTLRKRLTEFQDTPSGQLTIEEFMRLDLDQECDPPCYTTGLKNKK
YQQLEIELEKKMEDFEEEIHCYEDEIDAELQNCRPKLRGVYAAYTKETATEVPEEVGDDD
DVSTPSKMSAATDEEREEEDELEAVAKHFGKEMSELTLEALIKLEQKAPEDEEEEEEEGG
SPKRKGPTLESILGRMPTASTLGLPESISKCFGEEKENDGAADSGELDLSGIDDKEIELY
LLDDGEVKVKTALWMAENSDYLKQLKEKEAKIAKEKELGIYKERKPRGPSKKRPPIRANT
ADEAIEKMLEQKKISSKINYDVLKDLNVKPGSSPARQPDTPKREASAVKLTGRNRSSPRA
PLSLSTPLSTLGKRLQPFITGLPKKKMAMEQAAAHNPLPVPVGNPDSGVVVESGPVVYDD
AAEEEEDEEEETCVSAMELLGSNDYGSDADYDDGF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccaaagcgtgcaagaactgcggcagctcggacgtggatgtggaccaggcgcgc
ggcgatgccgtctgcatgggctgcggctccgtgctggaggacaacatcatcgtgtccgag
gtggagtttgtggagtcgggaggcggaggctcgctcgccgtcggacagtttgtctcttcg
gaaggaaacaagaatcccgtttttggagaaggtcaccacggaattgggtcggagtcccga
gctcagactctgcagagggccaaacagcacatcaacactctgggtcgccagctgcagatg
aaccagcactgtttggacacggcctataatttctacaggatggcgctcggcaaacacctg
acgcgtggacgcaaggcgtcgcacgtcatcgccgcgtgtctctacctggtctgccgcacc
gagggaacgccacacatgctgctggatttcagtgatgtcctgcaggtgaacgtctacgtc
ctgggaagaacctttctggtcctgtcaagagagctgtgcatcaacgcctcagctatagat
ccgtgcctgtacattccccgctttgcccagaagctggagtttggtgagaagaaccacgag
gtctccatgacggcgctgagactggtgcagaggatgaagagggactggatgcacacggga
cgaaggccgtcgggactctgtggagcagctctcctcgtcgccgcccgtatgtacgacttt
tgccgcacgaccaaagaaatcgtcaaagtggtgaaagtgtgtgaaagcactctgaggaaa
agactgaccgagttccaggacacgccctccggtcagctgaccatcgaggagttcatgagg
ctggacctggaccaagagtgtgacccgccgtgttacacgactggactgaagaataagaag
taccagcagctggagattgagctggagaaaaagatggaggactttgaagaggaaatccac
tgctacgaggacgagatcgacgcagagcttcagaactgtcgacccaaactgagaggagtc
tacgccgcttacactaaagaaacggctacagaggtaccggaggaagttggtgacgacgac
gacgtctccacgccgtctaaaatgtccgccgccaccgatgaggagcgagaggaggaagac
gagctggaggccgtggccaagcactttggcaaagaaatgagtgaactcacactggaggct
ctgataaaactggagcagaaggcaccagaggacgaggaggaggaggaggaggaaggcggt
tctccgaagaggaaaggccccacactggagtccatcctgggcaggatgcccacagcgtcc
acactgggactccccgagtccatcagcaagtgcttcggagaagagaaggagaacgatgga
gccgctgacagcggggagctggacctgagcggcatcgatgacaaggagatagagctgtat
ctgctggatgacggagaagtgaaggtgaagacggcgctgtggatggcagagaactcggac
tacctcaaacagctgaaagaaaaggaggcgaagatagcgaaggagaaggagctgggcatc
tacaaagagaggaagccccgaggtccgtccaagaagcgtccgccgatcagagccaacacg
gccgacgaggccatcgagaagatgctggagcagaagaagatctcgtccaagatcaactac
gacgtcctcaaggacctcaacgtcaagccgggctccagtcccgcgcgacagccggacacg
cccaagagagaggcgtccgccgtcaaactgacgggacgcaaccgcagctcgccccgagcc
ccgctgagcctcagcacgccgctcagcactctgggaaaaaggttacagccgttcatcacc
ggtctgcccaaaaagaagatggccatggagcaggccgccgcccacaaccccctgccggtg
cctgtgggaaaccccgacagtggcgtggtggtcgagagcgggccggtcgtctatgacgac
gcagctgaggaggaagaggacgaggaagaggagacctgtgtcagcgccatggagctgctg
ggaagcaacgattacggctctgatgcagattatgacgacggattctag
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