Solea senegalensis (Senegalese sole): 122782997
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Entry
122782997 CDS
T07721
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122782997 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122782997 (mlh3)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122782997 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
RNA_pol_RpbG
KxYKxGKxW_sig
WW
Motif
Other DBs
NCBI-GeneID:
122782997
NCBI-ProteinID:
XP_043903562
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Position
LG16:17360068..17366591
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AA seq
1162 aa
AA seq
DB search
MIKCLPKDVQGKLRSGVAVPSLQQCVEELVLNGIDAGATCVGVRVDMESLKVQVIDNGAG
MSDEDMECVGNRYYTSKCSSLEDLDNLRWYGYRGEALASILSVASLVEISSRTRSSVKTH
VKMFKNGKGMAVFEAEAVRPSAGTTVVICSFFHNMPVRRGRVDAVLEVERIRHRVEAISL
MHPSVSFTLRNDCTGAMMVQLSKANNTYHRFVQIHSSERAKKLGEIAFAQRHFEVTGYIC
REGHYNSSLQFLYVNSRLLLKTRIHKLLNFLLRRLSSSNQKSDSPDGQSGLRSPKHKRNQ
ELHGVYIINIKCPYSEYDICLDPTKTLIEFKDWDGVLFCIEEAVKDFLRRENLLDDLDSS
SQEEDKRGNGNGEQARGSMLDCSAGITLASESVHRALKDVCVSEDSVCHESGPKLCKGDE
AGKIQNDRYAHKDCRDEPQCDLVQLEPASEETFNKAEGSSSVRPQESELKETLNNTASTS
NVTLPGDITGEMENQPVVYSNKPVLPDCQDAGGHKKISLSDPFIHERLYESLTPSLSRIN
KPVFLQQNLTQKAVERSFSSSSSSKSKISLDSDQDRCNNFVPVIPPKIPRIESCRRLSLW
KESGSLDTFRRIFAKSDEKKLPSLETCLQNSTRLPQTNSLIFHPRNPLEDQHDGDVTQTQ
RIELLSSLQDPVFRVQKDTSTKSRQSLAAKICHLKRHRPVGSNLLPGVYDTTSQDNICLE
SSGHDIQDSNNNGNLCDTALHHKPVSGCNTSLQISEEGEDTPSDDWLHHFDASVGKTVYV
NRVTGLSKYKEPPSEETHVRCTSDVTNMAVSVVSETGMEYRCYPFQMDIVLPFLPKSRTE
RVISSGLDGKDDGEESSNSLSSLYSKWNNPVFVRPPMVGVDISSGQADGLAVKIHNILFP
YRFSKAMIKSMKVICQVDKKFLACLINTRDEEPAAHNESEGNLLVLVDQHAAHERVRLEN
LVADSYEEAPNASGERRLRSSNILPPLEISVTEEEQRLLRSCQAHLENLGLELKYSQAAG
PQVFVGKVPLCFMERENNELKRGRPSVIKGIVEEYLREQTELLRSAGRVRGTLPLTVLKV
LASLACHGAIKFNHSLSRDECHSLVASLSSCQLPFQCAHGRPSIIPLVDVVHLDKEQQKE
PQKPNLQKLRRMHKAWELYGNR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgcttgcctaaagacgtccaggggaaacttcgctccggtgtcgccgtgccc
tccctgcaacagtgtgtggaggagctcgtcctcaacggcatcgatgccggggcgacctgt
gtgggggtcagggtggacatggagtcactcaaagttcaggtcatcgacaacggcgccggg
atgagtgacgaggacatggagtgtgtggggaaccggtactacactagcaagtgcagctct
cttgaagacttggacaacctgaggtggtacggttatagaggagaagccctggccagtata
ttatctgtagcatcacttgttgaaatctcatcccggaccaggtcatcagtgaaaacccac
gtgaagatgtttaagaacggcaaaggcatggctgtcttcgaggcagaggctgttcgaccc
tctgcagggacaactgttgtcatttgtagtttcttccacaacatgccagtgaggagaggg
agggtggatgctgtcctggaagtagagaggatcagacacagagtggaggctatttctctc
atgcatccctccgtgtccttcaccctgaggaatgactgcacaggagccatgatggtacag
ctcagtaaagccaacaacacctaccacaggtttgttcaaatacacagcagcgagcgagca
aagaaactgggagaaattgcctttgcacagaggcattttgaagtgactggttacatctgc
agagagggccactacaacagtagcctacagttcctgtatgtaaatagtcgactgctgctg
aagactcggatacacaagttgttgaactttctcctgcgcagactgagcagttcaaatcag
aaaagtgacagtccggatgggcagtctggactcaggagtccaaagcacaagcgaaaccaa
gagctgcatggcgtatacatcatcaatatcaaatgcccctactctgagtatgacatttgt
cttgatcccactaaaacgctaatagagtttaaagattgggacggtgttttgttctgcatc
gaagaggcagtgaaagatttcctccgcagggagaatttgttagatgatttggactcttca
tcccaagaggaggacaaacgtggcaatggcaacggtgaacaagcaagaggttccatgctg
gactgcagtgctgggataacactggcatctgaatctgttcatcgtgcactcaaagatgtc
tgtgtttcagaggacagtgtttgccacgagtcaggtccaaagctatgtaaaggagacgag
gctggaaaaatacaaaatgacagatatgcacacaaagactgcagagatgagccacagtgt
gatctggttcagctggaacctgcgtctgaggaaacattcaataaagcggaaggctcaagt
tcagtcagaccacaagagagtgaattaaaagaaacactgaacaatactgcctcaaccagc
aatgtaaccttaccaggtgacatcactggagaaatggagaatcagcctgttgtatacagt
aataagccagtgttacctgattgtcaggatgcagggggtcacaaaaagatcagtctgtct
gacccattcatacatgaaaggctgtatgaaagtctgactccgagcctgtcccgtattaac
aaaccagtatttctgcagcaaaatctgacacagaaagcagtggagagatctttttcttct
tcttcttcttcaaagagcaaaatttccctggattcagaccaagacagatgcaacaacttt
gtgcctgtcattcccccaaagattcccagaattgaatcttgccggaggttgtcgttatgg
aaggagtctggatcgcttgacacatttagaagaatatttgccaaatcagatgaaaagaaa
ttgccctctctggagacatgtttgcagaacagtactagacttcctcagaccaacagtctc
atttttcatcccaggaatccattggaagatcagcatgatggtgatgttacacagacacag
agaattgagttactaagcagtctccaagacccagttttcagagtgcaaaaagacacctcc
actaaaagcagacaatctttggctgctaaaatctgccatttgaaacgacacaggccagtg
ggttcaaacctgttgccaggcgtttatgacactacctcgcaggacaatatctgtctcgag
agtagtggccatgacatccaagacagtaacaacaatggcaatctctgtgatactgcactc
catcacaaaccagtctcaggttgcaatacaagccttcaaatatctgaagagggagaggac
acgccatcagatgactggctccatcactttgatgcatctgtggggaagacggtgtatgtc
aacagagtgaccggcctgagcaaatacaaagagccgccttctgaagaaacacatgtgcgc
tgcacatctgatgtcaccaacatggcggtcagtgtcgtctctgaaactgggatggaatac
agatgttacccatttcagatggatatagttttgcccttcctgcctaaatccaggacagag
agagtgattagttcagggcttgatggcaaagatgacggcgaggagagctctaattcactt
tcctcattgtactcaaagtggaataaccccgtgtttgtccgacctcccatggttggtgtg
gacatctcaagtgggcaagctgatggactggctgtaaaaatccataatatcctgtttcca
taccgcttttctaaggccatgattaagtcaatgaaggttatttgccaagtggataagaag
tttctcgcatgtcttattaacacaagagacgaggaacctgcagcgcacaatgaatctgag
ggaaatcttctggtgctggtggatcaacatgccgcacatgagagagttcgacttgaaaat
ttggttgcagattcctatgaagaggctccaaatgcatcgggggagagacgtttgcgttcc
tcaaatattttgccacctcttgagataagtgtaacagaggaggagcagaggctgctgagg
tcttgtcaggcacatttagagaatttggggctggagttgaagtactcgcaggcagcaggt
ccacaagtgtttgtggggaaggtcccactgtgcttcatggaaagagagaataacgagttg
aagcgcggacgaccatctgttatcaagggtatcgttgaggagtatctcagagagcagacc
gagttactccgctcagctggtagagtgaggggaactttgcctctcactgtgctcaaagtt
cttgcctccctagcttgtcatggtgccatcaaattcaaccacagcctgagcagagacgaa
tgccacagtttggtcgcatccttatcgtcttgccagctgcccttccagtgcgcccatggc
cgtccttccattattcctctggtagacgttgtccatttggataaagagcagcagaaggaa
ccacagaaaccgaatctccaaaagctgagaagaatgcataaagcgtgggaactatatgga
aatagatga
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