Solea senegalensis (Senegalese sole): 122783106
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Entry
122783106 CDS
T07721
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122783106 (msh4)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122783106 (msh4)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
LPD16
Motif
Other DBs
NCBI-GeneID:
122783106
NCBI-ProteinID:
XP_043903687
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Position
LG16:5502119..5508957
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AA seq
924 aa
AA seq
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MFHSSTEEVSTGGNYSKCGHTLATSPVDRSGLNETTSYGPPSTSSDFCHQSADESSTNSG
HGPALPRMTSGQFHHSITTGRTNPILLTTTSDSSSFHSHGGTPRFRRTPVSAGATGIHYA
HTPLTDHTVTSSSSANATSAASVIVAVVEGRGLARGEIGMASLNLKCPDLVLCQFADTGT
YAKVITKLHILVPLEILMPDTASEKGKGTKLFNLITENLPAVAFTAIQRKYFNERKGLEY
IRQLCAPEFGTVLMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSFKGSEQTTMID
SASATNLELVVNNRDHRSDHSLLGVLNHTKTPGGARRLRSNILEPLVDVDTINIRLDAVQ
ELLQDEELFFGLRNAIGHFLDIDQLLSVLVQVQKQETVQVAEAKITHVIQLKHTLDLVPR
LRVVLKNCSTALLKAYSTSLEDNRFDLILEQIKTIINDDTTYLKGSLNMRIQKCYAVRPN
VNEFLDIARRAYTEIVDDIAGLVNQMGEKYGFPMRTSFSTARGFFIQMKLEGLVLPEGKL
PSEFIKVTKHKNNYGFITADLMKMNDRCNEALREIFHISYVVICQLLSTIHEHIHCLYKL
SDAVSMLDMLLSLANACTISDYVRPEFTDTLAIKQGRHPILERIAGQQPVSNNSYISEGS
NFVIVTGPNMSGKSTYLKQVALCQIMAQIGSFVPADYASFRVADQIFTRIGVDDDFETNS
STFMLEMKEISYIIHNVSDRSLIIIDELGRGTSAEEGIGICHSVCEFLLGLKAFTLFATH
FLELCQLESLYPNVENQHMEVQHTRSSGTGAECVVYTYLLTRGCSEERHYGLRAAEMTAL
PSGLIQEAKIIASHVIQQLLAKHRSDPETQRQRAVYHLATRLLQAARNSKLDPDSLRMYL
KGLKKQYEAELQAAGQPASMDTTD
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatagcagcacagaggaggtgtcaaccggcggaaactactcgaaatgtggacac
actttggcgacttccccggtggacagaagtggactcaacgaaactacttcgtacggtccc
ccctcaacctcctcagatttttgccaccaaagtgcagacgaaagcagtacgaactccggc
catggccccgcattaccccgcatgacctcaggtcaatttcatcacagcatcacgacgggg
agaacgaatccaatactccttacaactacttcagatagctcctccttccacagccatgga
gggacacccagattcaggaggaccccagtgtctgctggggccacaggcatacattatgca
cacacaccactgactgatcacactgtgacaagcagctcctctgcaaatgcaacctcggct
gcctccgtgatagtggcagtagttgaaggccgtggtttggccagaggagagattggcatg
gccagtctcaacctgaaatgcccagaccttgtgctctgtcagtttgcagacactgggacc
tatgccaaggtcataaccaagcttcacatcttggtgccactagaaatactgatgccagac
acagctagtgaaaaaggaaaagggaccaaactgttcaaccttatcactgagaaccttccg
gctgtcgctttcactgcaatccaaaggaagtattttaatgagagaaagggactggagtat
attcggcagctgtgtgcaccagaatttggcactgtcctcatggaagtgcaagcaaaatat
tactgcctagcagctgcagcggctttgctaaaatacttggagttcatccagaactctgtc
tatgctgccaagtctttaaaagtgagctttaaagggagtgaacagacgaccatgattgac
tcagcatccgccactaacttagagttggtggtcaataatagagaccacaggagtgaccac
tctcttttaggggtacttaaccacacaaaaacccctggtggtgctagaagattgcgctcc
aatattctggagcctctggttgacgtggacaccattaacatacgtcttgacgctgtgcaa
gagttattgcaagatgaagagctcttctttggtttaagaaatgccataggtcatttcctt
gacattgaccagctgctctctgtgctcgtccaagtccaaaagcaggaaacagttcaggtg
gctgaagcaaagatcacacatgtcattcagctcaaacacactctggatctggtgccaagg
ttacgggtggtgttgaagaactgcagcacagctctactgaaagcttacagcacctcattg
gaagacaacaggtttgatctgatccttgagcagatcaagaccataattaatgatgatacg
acctacctgaaggggagtctgaacatgcgcatccagaagtgttatgctgtgcgccctaat
gttaacgagttccttgacattgcccgcagagcttacaccgagatagtggatgacattgca
gggctggtcaaccaaatgggggagaaatatggctttccaatgcgaaccagcttcagcaca
gcccgaggtttcttcatccagatgaagcttgaaggccttgttttgcctgaagggaaactt
ccctcagagttcatcaaggtaaccaagcacaagaacaactatggcttcatcacagctgac
ctgatgaagatgaacgatcgctgcaatgaggcactgagggagatctttcacatatcctat
gtggtgatatgtcaactgctgagcaccatccatgagcacatccactgcctttacaagctc
tctgatgctgtgtccatgctggacatgttgctgtcacttgcaaacgcatgcaccatctca
gactacgtacgtccagagttcacagacacactggcaatcaagcagggccgtcaccccata
cttgagcgaattgctggtcagcagcctgtatcgaacaacagctacatctccgagggcagc
aactttgtcatcgtcactggacccaacatgagtgggaaatccacctacctcaaacaggtg
gcactgtgtcagatcatggctcagataggctcttttgtccccgctgactacgcctccttt
cgtgttgctgaccagattttcaccaggattggtgtggatgatgactttgaaactaactct
tccacgttcatgttggaaatgaaggagatctcttacataatccacaatgtcagtgacaga
tccctgatcatcatagatgagctgggtcgtggtacaagtgctgaggagggtattggtatc
tgccactcagtctgtgagttcctcctcggcctcaaggcattcaccctgtttgccacacac
tttctggagctgtgtcaattggagtctctttatcccaatgtggagaaccagcacatggag
gtgcagcacacacgcagtagtggcactggtgctgaatgtgtggtgtacacatacttgctc
actagaggatgctctgaggagagacactatggtttgagagcagcagaaatgaccgctctt
ccttcaggtttaatccaagaggcaaagataattgcatctcatgttatccagcagcttttg
gccaaacatcgcagtgatcctgaaacccagaggcagagagctgtgtaccacctggctacc
cgcctgctgcaggctgccaggaactccaaactagacccagacagtctgcgtatgtatctg
aaaggcctgaagaagcagtatgaggcagagctacaggctgcaggacagccagcctccatg
gacaccactgactga
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