Solea senegalensis (Senegalese sole): 122783256
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Entry
122783256 CDS
T07721
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122783256 (lingo2b)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122783256 (lingo2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
ig
Ig_2
LRR_9
LRRNT
LRR_EndoS
V-set
LRR_Zer-1
Ig_C17orf99
C2-set_3
LRR_6
Motif
Other DBs
NCBI-GeneID:
122783256
NCBI-ProteinID:
XP_043903900
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All DBs
Position
LG16:complement(21612811..21616845)
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AA seq
622 aa
AA seq
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MTEGSVGKGEMQHPAQHHYHLFLGGALLLLLASSALSCPARCECSAQSKSVSCHRKRLST
IPEGIPIETRVLDLSKNKLRIVTPDNFSSFQQLEDLDLSDNLISVVEPGSFRSQLSLRSL
SFRSNLVQLVPAGVLSGLTNLSHLDLSHNRLVVLLDHAFQDLRRLTSLEVGDNELVFISQ
RAFMGLLGLQILILERSNLTVVPTDALAHLHNLVELRMRYLSITFLKPFSFKRLSHLRRL
EIDYWPWLDALPPLSLHGLNLTMLSITNTNLSAFPGAALRNLPYLTHLNLSYCRIQHIHQ
GELGLLPHLLELRLQGSHLISIEPLAFVGLKSLQLLDVSQNRLDSLERGVFSSPDGLRRL
CLGGNPLVCDCRMLWLLNSHKPPSLQILDVQPVCSAPEHLVGKTLRDLKEPLVSRYMTCS
KPRIGPNTTQLLMADEGQPARLSCTAEGAPRPAVVWITPHRRYITAKSSGRVEVRADGTL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSTSTGDRSHYSNRSSNYQTDSNSTSGN
GTVLYNMTVPIDIKTIIISTAMGCLSFLGVVVFCFLLLFAWSRGKGRHRNNFDIEYVPRK
SNGAAAEVTETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggcagcgtgggtaaaggagagatgcaacacccagcccagcatcactaccac
ctcttcctgggcggggccttgctgcttctcctggccagctcagctctgagctgccccgcc
cgatgtgagtgctctgcccaaagcaagtcggtcagctgtcaccgcaagcgcctgtccacc
atccctgaaggcatccccatcgagacgcgcgtcttggacctcagtaagaacaaacttcgc
attgtcacgccggacaacttctcctcgttccagcagctggaggacctggacctcagcgac
aacctcatcagtgtggtcgagcccggctccttccgctcgcagctttctctccgctcactc
agtttccgtagtaatctggtgcagctggttcctgctggtgtgctgtcaggtctgaccaac
ctctcccatctcgacctcagccacaaccgactggtggttctcttggaccatgccttccaa
gacctgcgcaggctaacgtcgctggaggtcggtgataatgagttagtcttcatctctcag
cgagcctttatgggattactcggactacagattctgatcctggaacgctccaatctgaca
gtggtcccgaccgatgctctggcacatctgcacaatctggtggagctacgcatgcgctac
ctgagcatcacttttctaaagcctttctcttttaagaggttgtctcatctccggcgtctg
gagattgattactggccctggctggacgcgctgcctcctctctctctgcatggactcaac
ctcaccatgttgtctataaccaacactaacctgtcggccttccccggcgctgcactgcgc
aacctgccctacctcacacatctcaacttgtcctactgccgcatccagcacatccatcag
ggagaactgggtctgctcccacatctgctggagctccgcctccaagggtctcatcttatt
tctattgagcctcttgcatttgtgggcctgaaatctctgcaactgctggatgtgtcgcag
aaccgcctggactctctggagaggggcgtgttctcctcaccagacggcctccggaggctt
tgtctgggaggaaatccgttagtgtgtgactgcaggatgctttggctgctcaacagccac
aagcccccctccctgcagatcctggatgttcagcctgtgtgcagtgcccccgagcacctt
gtggggaaaactctgcgtgacctcaaggagcccctggtgtccaggtacatgacctgctcg
aaaccacggatcggaccgaacacgacacagctgctgatggccgacgagggtcagcccgct
cgcctgagctgcacggccgagggagcgccgcggcccgctgtcgtctggattacacctcac
agacgttacatcacagccaagagcagcggacgagtggaagtccgagcagatggtaccctg
gagatcaaggctgcggagctgcatgacagcggggtgtacttgtgcattgccagtaaccct
gctggcaacgcgagtctgtcagcctctttagctgtgaagagcacgagcactggggacaga
tctcactatagcaacaggagctcaaactatcagacagactctaacagcacatcggggaac
ggcacagtgctgtacaacatgacagtccccatagacattaagactatcatcatatctaca
gccatgggctgcctgtccttcctcggtgtggtggtgttctgcttcctgcttctgttcgcc
tggagccgagggaaaggacgccataggaacaactttgatatcgaatacgttcctcgcaaa
tccaacggcgcggcggccgaggtgacagaaacgagcggcccgagacgcgtcaacatgaaa
atgatttga
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