Solea senegalensis (Senegalese sole): 122783338
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Entry
122783338 CDS
T07721
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122783338 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssen01002
]
122783338 (capn3a)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
122783338 (capn3a)
Peptidases and inhibitors [BR:
ssen01002
]
Cysteine peptidases
Family C2: calpain family
122783338 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
122783338
NCBI-ProteinID:
XP_043904008
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All DBs
Position
LG16:complement(20924510..20943206)
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AA seq
714 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNGQDFNTLRQECLQKKSLFEDDSFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPAEQSYSERYGGIFHFQFWRYGDWVDVVIDDRIPTVNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARLETRTVTGLVKGHAYSVTAVEECKASQASKVRLVRLRNPWGQVEWN
GPWSDNSKEWTSLSKNEKDKLQHQSAEDGEFWMSFEDFRKNYTKIEICNLTPDALEDDKI
HKWTVSMNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDSEVGCTFVVALMQ
KNRRKERKMGANLFTIGFSIYEVPKEMHGNKQHMQKDFFLINASKARSKAYINLREVTQR
FRLSPGEYVIVPSTYEPHQEGEFILRVFSEKKNTSEEIENRIEADHPVPAPASAGEESED
DQQFRSIFQEIAGDEMEITANELKNVLNRVISKHKDLNTEGFSLESCRSMIALMDVSFMD
GTGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAINDAGFRLNNQLYDIIT
MRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQEGDGTIRLSVLEWLQLTMYT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccgtctggctttttctgtgaccggttgatccgggaacgagagaggaga
gacggagaaggttctctgaacaaaccactacgcttcaatggtcaggacttcaacaccctg
agacaggagtgtcttcagaagaagagtctgtttgaggatgactctttcccggccactgtg
gagtctctgggcttcaaagagctcggacacaagtcgaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatttgtgagaatccacagttcattgtgggaggagccagtaggaca
gacatctgccagggagatctaggtgactgctggttgttggccgctatcgcttgtctcacc
ctgaacgagaagcttctctaccgtgttgttcctgcagagcaaagctactcagagagatat
ggcggcatcttccacttccagttctggcgttacggtgactgggtggatgtcgtcatcgac
gaccgcatcccaaccgtcaacaaccaactggtcttcactaagtccgcagagagaaacgag
ttctggagtgccctgctggagaaagcctacgccaagcttcacggctcctatgaggccctc
aagggtggaaacaccacagaggccatggaggatttcaccggtggagtcacagagttctac
gagatgaaggaggctcccaaagagctttacaaaatcatgaagaaagctctggagagaggc
tccctcatgggctgttctatcgattctctggttcccgctcgccttgagactcgcaccgtg
actggacttgtgaagggtcacgcctactctgtgacagcagtggaggagtgtaaagcgtcg
caagcgtccaaagttcgtctggtgcgtctcaggaacccgtggggtcaagtggaatggaac
ggtccctggagtgacaactctaaggagtggacctcactgtccaagaatgaaaaagataag
ctacagcaccagagtgccgaggacggcgagttctggatgtcatttgaggatttcaggaag
aactacaccaagatcgagatctgtaacctcacacctgatgctctggaggacgacaagatc
cacaagtggacggtttctatgaacgagggacgctgggtgagaggctgctccgccggaggc
tgcaggaactatccagacactttctggacaaaccctcagtatcgcctgcgtctgctggag
gaagacgacgatcccgaggacagcgaggtgggctgcaccttcgtcgtggcgctgatgcag
aagaatcggcggaaagaacgcaagatgggagcaaatctctttaccattggattctccatc
tatgaggtgcccaaagagatgcacgggaacaaacagcacatgcagaaggacttcttcctc
atcaacgcgtctaaagctcgctccaaggcctacatcaacctgcgcgaggtgacccagcgt
ttccgcctgagcccgggagagtacgtcatcgttccctccacgtacgagccgcaccaggag
ggagaattcattctgagagtcttctcagagaagaagaacacctcagaggagatagagaac
aggatcgaggccgatcatccagtgccggcgccagcgtcagcaggagaagagagcgaggac
gaccagcagttcaggagcatttttcaggaaatagccggagacgaaatggaaatcactgca
aatgaactgaaaaatgttctcaacagagtgatcagcaaacataaggacctgaacactgag
ggcttcagtctggagagttgcaggagcatgattgctctgatggacgtatcctttatggac
gggacgggtcgactcaatctgcaggagttcagacatctgtggaataagatcaaacagtgg
cagggaatctttaaacactacaacgctgaccagtctggaagcatcaacagctacgagatg
aggaacgccatcaacgatgcaggcttccgtctcaacaaccagctgtacgacatcatcacc
atgcgctacgctaatgagaacatgaacatcgacttcgacagcttcatcagctgcctggtg
cggctcgaagccatgttcagagcgttccaggcctttgatcaggagggagacggtaccatc
agactcagtgttctggagtggctccagttgaccatgtacacctag
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