Solea senegalensis (Senegalese sole): 122783494
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Entry
122783494 CDS
T07721
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122783494 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122783494 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122783494 (srsf5a)
Spliceosome [BR:
ssen03041
]
Common components
Common spliceosomal components
SR proteins
122783494 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CoV_nucleocap
CDC45
Motif
Other DBs
NCBI-GeneID:
122783494
NCBI-ProteinID:
XP_043904276
LinkDB
All DBs
Position
LG16:5903321..5909293
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AA seq
302 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGRGDGSSYRQSRSSGSRYGPPMR
TDHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKNAISKLD
GTELNGRKLKIFEDRRSRSKSRSRSRSYSRSKSRSRSRNRSRSRSRSLSRTPEKKTSGGG
GKSGARSPSRSKSRSKSRSRSRSRSRSPPPAQNKQSRSRSRSPRSRSRSRSRSRSASADS
KH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgtgtcttcattggccgcttgagcccacatgccagagaaagagacgtt
gagaagtttttcaagggatatggacggattcgggaaatcaacttgaagaatggattcggc
tttgtggaatttgatgaccatagagatgcagatgatgctgtatacgagctgaatggcaaa
gagttgtgtagcgaaagggttactattgaacatgctcgctctagaagaggaagaggtggt
ggacctggaatgggccgtttcggtggtggaggtggtggtggtggcggcggcggcagagga
gacggaagcagctaccgccagtcccgcagcagtggatccagatatggccctcctatgcgg
actgaccacagactcattgtagagaacctgtcttcacggatcagctggcaggacctgaaa
gacctgatgagaaaagcaggtgaagtcacctttgtggacgcacacagacccaacaaaaat
gaaggggtggttgagtttgcatctcgcagtgatatgaagaatgccatctccaaacttgat
gggacggaactaaatggacgcaagctgaagatctttgaagacaggagaagtcgcagcaag
agccgctcccgctcccgcagctactctcgctcaaagagtcgttcccgcagccgaaaccgc
tccaggagccgctccaggtcactcagccgcacccctgagaagaagacatcaggaggaggg
ggcaagtctggagccagatccccctccagatccaagtctcgttccaagtcccgatccagg
tctcgctcccgctcccgctccccacctccggctcagaacaagcagtcccgctcccggtcc
cgctcaccacgttctcgctccaggtcccgctcacgctcccgctcagcctccgcagacagc
aaacactga
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