Solea senegalensis (Senegalese sole): 122783864
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Entry
122783864 CDS
T07721
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122783864 (stxbp5a)
Membrane trafficking [BR:
ssen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122783864 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122783864 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_VPS8
CFAP43_N
VPS8_N
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
122783864
NCBI-ProteinID:
XP_043904718
LinkDB
All DBs
Position
LG17:complement(11926197..12008457)
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AA seq
1143 aa
AA seq
DB search
MKKFNIRKVLDGLKEVSSSAPSVQVGPQENHLIQETLQSDHFQLCKTVRHGFPYQPSAMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDTVHL
WNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
IGDPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGNTDVSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDMESPDGGGGGGEQTAALPTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVR
STPLKQSPGYQVDLVVQLVWVSGEPPQPITSLALNSSCGLVVFGNSNGLAVVDYIQKTVV
LNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSATSEDRCKSPTSVLTSNSNLQ
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDK
EAREAISSFHFCETFARKGDSTLTQCLYVGTSLGTVLALALTLPPAGEQRQLQPVIISPT
GMLVRLKGSIMRMAVLDSTGSQLPPAFESWYEPNISADGEEREKVRKRRPVSVSPSTSQD
LNESQYAVVCSEKQAKVIALPSQSCIYKHSITETSFILRADVVQMSQGMCVACFCANGHI
MTLSLPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEVQRITYSQDTCENLQE
MLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEIAAGKASRSLAQHIPGPGGIE
GMKGAASGVVGDLARARIALDERGQKLGELEERTAGMMASADSFSKHAHEMMLKCKDKKW
YQF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggtttgaaagaggtctcctcctccgcc
ccgtcggtccaagtgggaccacaggagaaccatctgatccaggagaccctccagtccgac
catttccagctctgcaagactgtccgtcatgggttcccctatcagccgtcggccatggct
tttgaccctgtgcagaagatactggccatcggcacccagagtggagctctcagattgttt
ggtcgtccaggtgtggagtgctactgtcagcacgagagtggagctgctgttatccagcta
cagtttctcatcaatgagggtgcactggtgagcgctttggccgatgacaccgtccatttg
tggaacctgaggcagaagagaccagccatccttcactcccttaagttcaacagagagaga
ataacttactgccacctgcccttccagagtaagtggttgtacattggcacagaacgaggg
aacatccacatagtcaacgtggagtcctttatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctctaaggctcaccctggtccagttgtccatataagtgacaac
cccatggatgagggcaagctcataattggatttgagtctgggattgtggtcctgtgggat
ttgaaatcaaagaaggccgactatcgctacacttacgatgaggcgatccactcggttgct
tggcatcacgagggcaagcagttcatttgcagtcactcagatggaactctgaccatatgg
aacatcagaggccagggcaaacccatacagacaatcaccccacatggaaaacaacccaag
gatgggaagaagccagagccttgtaaacccattcttaaagtggaatataaaaccaccaga
attggggatcccttcataatcctgtctggtggtctgtcctatgacacggtgggccggcgg
ccttgtctgacggtgatgcatggaaagagtacagctgtgctggagatggactaccccatc
gtagatttcctcacactgtgtgagacaccatatcctaatgattttcaggaaccttatgct
gtggtcgtccttctggaaaaggatttagtggtgatcgaccttgcacaaaatggctatccc
attttcgaaaacccgtaccctctgaccatccacgagtctcctgtgacctgctgtgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggctcgcggcagaaa
cgacagggctacagcaaaaaggaatggcctattagtggtggaaactggggtcaaggcaca
caaagctacccagagatcatcatcactgggcatgctgatggaactgtgaagttctgggat
gcctctgcaataatgcttcaggtgctctataagcttaaaaccgccaaggtgtttgacaga
aaccggtccaaggaggacaagggcaacacggacgtgtcagacgaggacccctttgccatt
cagattatggcctggtgccctgagagccggatgctctgcgtggccggggtgtcagccaac
gttatcatctaccgcttcagcaagctggaagtaactactgaggtggtgcagctattagag
gtgcgaatgcagtacgagctgaatgacatggagtctccagatggtgggggcggaggagga
gaacagactgcagcgcttccaacacccggtgcctcgcctcagacgagcggcccaccttca
cacccctccaccagcagcaacaactctgacggaggcaacatgccctgcctcaaagtgcgc
agtactcctctgaagcagtctccaggttaccaggtagatttggtggttcagttggtgtgg
gtgagcggagagcctcctcagcccatcacgagtctggcactcaactcctcctgtggctta
gtggtgtttggcaacagtaacggtctggcagtggtggactacatccagaagacggtagtt
ctaaacttggggacggtcgagctttacggctccaatgacccctaccagagacagccgcgg
tcgccaaggaagacaagacagccttccggaggcctgtgcgacatcaacgagggctcggcg
acgtcagaagaccgatgcaagtcccccacttcagtgttgacgtcaaacagcaatctacag
cagttctacaatggaggaggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtctgtatgcccgccgcggggtgccaacccatta
gaccaccgggacaactcctttagccgctctcgctcctccagtgtcaccagcatcgataag
gaagcccgcgaggccatcagctccttccacttctgcgagaccttcgcccgtaagggggac
agcactttgacgcaatgcctgtatgtgggcacctccctgggaactgtgctcgctctggcg
cttacattgccacctgcgggcgagcaacggcaattgcagccagtcatcatttcacctacg
ggcatgctggtacgactgaagggcagcatcatgcgaatggctgtcctggactccacaggg
tcccagctgccccccgcgttcgagtcttggtacgagcccaatatctcagcagacggcgaa
gaaagagagaaggtgcgaaagcgccggcccgtctccgtgtccccttccacgtcgcaggac
ctcaacgagagccagtacgccgtggtgtgttcggagaaacaggccaaagtcatcgccctc
ccctcccagagctgcatctacaaacacagcatcacagagacctccttcatcttacgagca
gatgtggtgcagatgagccaaggcatgtgcgtggcttgtttctgtgccaacggccacatc
atgaccctcagtttaccaggactgagaccgcttatggatgtaaactacctgcctttgaca
gacatgcggatagccaggacattttgtttcacaaacctaggtcaggccatgtacctctgc
tccccaacggaggtccagaggatcacatacagccaggacacctgtgaaaacctacaagag
atgcttggagaactctttacaccagtagaaacaccagaggcaccaaacagagggttcttc
aaaggtctttttggaggaggagcacagtcactggacagagaggagctatttggagagatc
gcagctggaaaggcatctcgaagcctggctcagcacatcccaggcccgggtggcatcgag
ggcatgaagggggcagcgtctggtgtggttggagacctggcacgtgcccgaatagcactg
gacgagagaggccagaagctgggcgaactggaggagaggacagctggaatgatggccagc
gcggattccttctccaaacacgcccatgagatgatgctgaagtgcaaggacaaaaaatgg
taccagttctga
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integrated database retrieval system
