Solea senegalensis (Senegalese sole): 122784004
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Entry
122784004 CDS
T07721
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122784004 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122784004 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
PDZ domain-containing proteins
MAGUK family proteins
122784004 (pals1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
PDZ_6
SH3_2
L27
SH3_1
PDZ_2
ZNHIT3_C
SH3_9
Motif
Other DBs
NCBI-GeneID:
122784004
NCBI-ProteinID:
XP_043904962
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All DBs
Position
LG17:complement(13383354..13398777)
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AA seq
650 aa
AA seq
DB search
MITSHMNGYAQEASGQAMSQRERAVDCPGEEGSLVKSPQSSAHMERIQHYQEELRKRREE
DSRGKHEIDPNASLRLKKLSQNPKVGIDNPTFEGKEKATKDACYVEPVAEVGELLQALSW
IQQCLTDTQSQQDVELIAQLLAKEDFKNAFTIYSAVSQQIGRVTPTLPLTAQAQDLCQEV
QRILQTSHQKEGSELRSLLTNPHLQALMQAHDTVAGQEMKDENATQSLSETVKLVRLEKA
RDTPLGATVRNDMDSVVVSRVVKGGAAERSGLLSEGDEILEINGISIRGKHINEVHDLLQ
QMQGTLTFLLIPSSQIKPAPHRQTVMHVRAYFDYDPSDDPFVPCRELGLSFQKGDILHVI
SQDDPSWWQAYRDGDEDNQPLAGLIPGKSFQQQRESLKKTVTDRSREQAGKNWYSKKSKK
QKKKNTSNFSKNADYDDILTYEEMSLYHQPANRKRPIALIGPTNSGHEELRRRLLSIEPE
KFAVAVPHTTRNQRIHEKNGREYHFVSRSAFEGDLGAGKFIESGEYEKNLYGTSTDSVRH
IVNSGRIGLLCLHTRSLQVLRSSNLKPYVIFIAPPSQERLRTLLATGGKTPKPEELKDVI
EKAREMEHSFGHFFDATIVNMDPEQAFNELRRLIDKLDTEPQWVPTSWLC
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatcccatatgaacggttatgcacaagaggcctctggtcaggccatgagtcaa
agagagagggccgtggactgtccaggggaagagggtagcctcgtcaaatctccacaaagc
agtgcccacatggagaggatccagcactaccaggaggagctgaggaagaggagagaggaa
gacagcagggggaagcacgaaatcgaccccaacgcttcactgaggctcaagaagctttca
cagaaccccaaggtggggattgacaaccccacgttcgagggaaaagagaaggccaccaaa
gacgcatgttacgtcgaacctgtagctgaagtcggggagttgctgcaggctctgagttgg
attcagcagtgtctgactgacacacagagccagcaggatgtggagctgattgcgcagctc
cttgccaaggaagactttaagaatgcctttaccatctacagcgccgtttcccagcagatc
ggcagagtcacgcccaccttaccgctcacagcacaagcgcaggatctttgccaggaggta
cagaggattctgcagacgagccatcagaaggagggttcggagctcaggtccctgctcaca
aatcctcatctccaggcactgatgcaggctcatgacactgtggcgggacaggaaatgaaa
gacgaaaacgcgacccagtcccttagcgagacggttaaactcgtgcggttagagaaggcc
cgtgacactcctctgggtgcgactgtccgtaacgacatggacagcgtggtggtgagtcgt
gtggtgaaaggcggagcagccgagcgaagcgggctcctcagtgagggagacgagatcctg
gagatcaatgggatctctatacgtgggaaacacatcaatgaagtccatgacttactgcaa
caaatgcaaggcacgctgaccttcctcctcatccccagctctcagatcaaacctgcccca
cacagacagactgtgatgcacgtgcgagcctactttgactacgacccctctgatgacccc
tttgtgccgtgtcgggagctgggcctgtccttccagaaaggggacatccttcatgtcatt
agccaggacgaccccagctggtggcaggcctacagagacggagacgaggacaaccagcca
ctggctggactcattccagggaaaagcttccagcaacagagagagtccttgaagaaaact
gtaacagacaggagtcgagagcaagcagggaaaaactggtattcaaagaagagcaagaaa
caaaagaagaagaacacatcgaacttcagtaaaaatgctgactatgacgacatcctgacc
tacgaggagatgtccctttatcaccagcctgctaatcgtaaacggcccatagcattgatt
ggtcctacgaacagcggccatgaagagctgcggcggcggcttctgtccattgaaccggag
aagtttgctgttgcggtgccacacacgaccagaaaccaaaggatacacgaaaaaaatgga
cgcgagtaccattttgtgagtcgatctgcctttgaaggagacttgggggcagggaagttc
atcgagtctggcgaatatgagaagaatctgtacgggaccagcaccgactcagtccgacac
atcgtgaactctggacgcatcggtttgctctgcctgcacacgaggtcactacaagtgttg
cgttcctccaacctcaagccctatgtcatcttcatcgctcctccttctcaggaacgacta
cgcaccctgctggccacaggggggaaaacaccaaagccagaggagctgaaggacgtgatt
gaaaaggcccgtgagatggagcacagttttggccacttctttgatgcaaccatcgtgaac
atggatccagagcaggcgttcaacgagctgcgcagactgatcgacaagctggacactgag
ccacagtgggtgcccacgtcctggctgtgctag
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integrated database retrieval system
