Solea senegalensis (Senegalese sole): 122784042
Help
Entry
122784042 CDS
T07721
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122784042 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122784042 (nup43)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122784042 (nup43)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122784042 (nup43)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122784042 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
EIF3I
KNTC1_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
122784042
NCBI-ProteinID:
XP_043905035
LinkDB
All DBs
Position
LG17:15830876..15834735
Genome browser
AA seq
372 aa
AA seq
DB search
MESVNAKYVSQKISKTRWKPVSHSTLQQPDIFATGSWDNENNKLSLWSIGNHGSPGMDDG
FEGEPQLLCEHKHDGDVLDLQFLDQDRIVTASSTGAVSIYRHHPNSQTISVSQHWARTHR
YPCDNAPCTGVVCSSPEIVSVGEDGRIIVFRADQEGVIRTIENADSSTIHAVTYLRTTEI
LTVNSIGQLKLWDFRQQSNSPSQILSLSGDRVPLHCVDRHPNQQHIVATGGQDGMLCVWD
VRQGNAPFSLMEAHSAEMWEVHFHPTNPDHLFTCSEDGSLLHWETSSPSDMPSFLQGGRN
NSMVSRSAMAPAGGNQSLISAWLSGDTSKARLETTHMLPSQTLSVNSMDVLGQCLVCGTD
EEAIFVNRQIPV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtcaatgctaaatacgtgtcccagaaaatcagtaaaaccagatggaaacca
gtatcacattcgactctgcagcagccggacatctttgcgaccggctcgtgggacaatgag
aacaacaagctatccctctggtccattgggaaccatggaagtcctggcatggatgatggt
tttgaaggagaaccacagcttttatgtgaacacaagcatgatggagatgttctagacctt
cagtttttggatcaagacagaatcgtcacagcatcgtcgactggagccgtcagcatctac
cgccaccacccaaacagtcagacaatatctgtttctcagcactgggcgagaacacatcgc
tacccatgtgacaacgccccctgtactggtgtggtgtgcagcagccccgagatcgtctcg
gtcggtgaagacggcaggatcatcgtcttcagagccgaccaggaaggagtgattcgaacc
atagaaaacgcagacagcagcacgattcacgctgtgacgtacctgaggacaacagagatt
ttgacagtgaactctatcggccaactcaagctgtgggattttagacaacagagcaactca
ccatcacagattctctccctgtcaggagatagagttcctctacactgtgtggacagacat
ccaaaccagcagcacattgtggccacaggaggccaggacggcatgctctgtgtctgggat
gtgagacaaggcaacgctcccttctcactcatggaggcacactctgctgaaatgtgggag
gtccacttccacccaaccaacccagaccatctgttcacctgctcagaggacggctcgctg
ctgcactgggaaacatcctcaccttcagacatgccctccttcctacaaggtggcaggaac
aacagtatggtgtctcgcagtgcgatggctccagctggaggcaaccagtcgctcatcagc
gcctggttgagcggagacaccagtaaagcccgcctggaaaccactcacatgctgcccagc
cagacgctgtcggtcaacagcatggacgtgcttggacagtgtctcgtctgtgggactgac
gaagaggctatttttgtcaacagacagatcccagtttga
DBGET
integrated database retrieval system
