Solea senegalensis (Senegalese sole): 122784173
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Entry
122784173 CDS
T07721
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122784173 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122784173 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122784173 (srsf5b)
Spliceosome [BR:
ssen03041
]
Common components
Common spliceosomal components
SR proteins
122784173 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
DUF7376
Motif
Other DBs
NCBI-GeneID:
122784173
NCBI-ProteinID:
XP_043905251
LinkDB
All DBs
Position
LG17:complement(15165340..15171366)
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AA seq
297 aa
AA seq
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MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGSGAGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENR
LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEI
NGRKIKLIEAAKKRSRSRSRSESSSRSRSRSRGRSASRSPRRSRTPTKAHDRSRSRSGSR
AGSSSPSKSKEPAKRSSNMRSKSATPPSPPPAQRASVSRSRSRSRSRSRSPSTDSQR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtattttcatcggccgactgagcccctctgccagagagaaggacgtg
gagaggttcttcaaaggatacggccgaatccgagatatcgacctcaagagaggctttggg
tttgtggagtttgacgaccccagggatgctgaagacgcagtgtatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccatcgagcacgcccgcgtccgcctgcgtggcggtcgt
ggcaggggcggcagtggtgcaggaggaggtggaggaggaggacgtttctctgatcgctac
ggccgaggctcccagaacagtcggagtcggaatcctcctccaatgcggactgaaaaccgc
ctgatcgttgagaatttgtcctcccgtgtcagctggcaggacctcaaagatttcatgaga
caagctggagaggtgacattcgctgacgcacaccggcccaagctcaacgaaggggtcgtt
gagtttgcctcttacagcgacctgaaaaatgcccttgagaaactgtctggaaaggaaatc
aatggcaggaaaatcaagctcattgaagcagccaagaagaggtccaggagtcgttcccgg
tcagagagctcctcccgatcacgatcccgctctcgcggtcgctccgcatcccgctccccc
aggcgctcccgcacccccaccaaggcccacgatcgctcgcgctcccgcagcggctcccgc
gccggcagctcttcgccttccaaatccaaggagcccgccaagcgctcctccaacatgagg
agcaagtcggccacgccgccgtcccctccgcccgcccagagagcctccgtgtcccgttcg
cgctctcgctcgcgttcccgatcgcgttctccgtccacagacagccaacgctag
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