Solea senegalensis (Senegalese sole): 122784350
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Entry
122784350 CDS
T07721
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122784350 (taf1b)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
122784350 (taf1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
122784350
NCBI-ProteinID:
XP_043905527
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All DBs
Position
LG17:complement(20576098..20582500)
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AA seq
567 aa
AA seq
DB search
MDDEHTASFTEACGQCSAVNWGISDEGRFYCRSCHNVIERTKEVEDTYVDRGSIRVSTLS
RGSRTKRSECGRQWMICEGFQFILKNQADALIALGVSSHFKDQVLCQLWRLYLQRSRQAF
TRNPVRSVAFKMRRPGSDSESAGESWAASASETDGDTNLSNAEDSSDWPQLSGSADALTY
ISSPRRRSHRLMSMRKTLALIHVALTWSRESLTLSDLLRLVNEGHVPFVDAYDDLPAEMS
LSGKDALIFRVESVPSHRVVHSEAQALVLYLQLKSFPPISRQCLLHPALLSLRYLTDANL
PDKLHPWLCRLMDCAGLTDQTFFTFDPLSFPFLPQFDVQTAAIIIVTMKLMFGLDDHTEW
DLCNVAGVKDDHDPDPDPDPEAEFNLRRWYRVTHAALTRAQQSRECHDVARKQWKTKKPL
FPSKRMKAVMVKRKRTAELVHRCFHKLSCPSVQRRGPSTFRFCWGDEDGVDGPSLHHKKL
SAVLSLKDHALTPLNTAYWHPPLTSCNPRECVTHFSEMEAELPRSFMWLLQLFSFLLDVK
PDCLYEAVLKVERRILATGTRSGRERR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacacacggccagcttcacagaggcgtgtggtcagtgctctgcggtgaac
tgggggatttcagatgaaggtcgtttctactgcagatcgtgtcacaacgtcatcgagaga
accaaagaggtggaggacacctacgtcgaccgcggctccatcagagtctccaccctcagc
agaggatccagaaccaagagatcagagtgcggtcgtcagtggatgatctgtgaaggtttt
cagttcatcctgaagaaccaggcagacgctctgatcgcactcggagtctcttctcacttt
aaagaccaggtgttgtgtcagctgtggagactttacctgcagaggagcagacaggcgttc
accaggaacccagtgaggagcgtcgcctttaaaatgcgacgcccaggttccgactcggag
agcgcgggtgagtcatgggccgcctccgccagtgagacagacggagacaccaatttgtcc
aacgcagaggacagcagcgattggccgcagttgtcgggttcggccgacgccctcacttac
atttcgtcgcccaggaggcggagccacaggctgatgagcatgaggaagacactggcgctg
attcacgtcgcgctgacgtggagtcgtgagtcgctgacgctcagcgatctgctgaggctg
gtgaatgaaggtcacgtcccgttcgttgacgcctacgatgaccttcctgcagaaatgagt
ctttcaggcaaagacgctttgatcttcagagtcgagagtgtcccgtcccatcgcgtggtg
cacagcgaggcccaggctctggttctttacctgcagctgaaatcttttcctccaatcagc
cgtcagtgtttgctgcacccggcactgctcagcctgcgctacctgaccgacgctaacctg
cccgataagctccacccgtggctctgcaggctgatggactgcgctggtttaacagatcaa
acgttcttcacctttgatccgttgtcgtttcccttcctgccgcagtttgacgtccaaaca
gctgcgatcatcatcgtcaccatgaagctcatgtttggtctggacgaccacacagagtgg
gatctatgtaacgtcgctggagttaaagacgaccatgatcctgatcctgatcctgatcca
gaggcggagtttaacctgaggaggtggtacagagtgacgcacgccgctctgacccgagct
cagcagagcagagagtgtcacgacgtcgccaggaaacagtggaagacaaagaaacctctg
ttcccaagcaagaggatgaaagctgtcatggtgaaaaggaaacgaacagcagagctggtc
cacaggtgtttccacaaactctcctgtccctctgtccagcgccgcggtccatccaccttc
aggttctgctggggggacgaggacggagtggacggacccagtctgcaccacaagaagctg
agcgccgtactgagcctgaaagaccacgccctcacgccgctgaacaccgcctactggcac
ccgccgctgacctcctgtaacccccgtgagtgcgtcactcacttctcagagatggaggcg
gagcttccgaggtcgttcatgtggctgctgcagctgttctccttcctgctcgacgtgaag
cctgactgtctgtacgaggccgtgctgaaggtggagagacgcatcctcgccaccgggacc
aggtccgggagagaaaggagatga
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