Solea senegalensis (Senegalese sole): 122784378
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Entry
122784378 CDS
T07721
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122784378 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122784378 (lmo7a)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122784378 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122784378
NCBI-ProteinID:
XP_043905565
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All DBs
Position
LG2:19385386..19432931
Genome browser
AA seq
1482 aa
AA seq
DB search
MEWREQSNISCDEAFVEAQRWIEGVTKKKFGSNNFRSALENGVLLCELINKIRPGIIKRI
NRLPTPIAGLDNLNVFLRACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETDRRLKNVLIS
IYWLGRKAQCDNSYDGPYLNFKAFEGLLGTALYKALQESSTQKGSNVRDSGFGDSWYSER
EELYQLRGGGGGGHRSDDSLDSLDSLGSRPHSISSDTTLKGSSEGCCSDTEADSIYSMAG
NKDTLSYRRSVVITPKTAAQFNQFLPTKDKSTAYVPAPLRKKRAERNDDNRRSWANPIYT
EDDGRLTRQQQMEESIDGSKSTSDIQTDTAILRQARYEELQKFREQIKESDDKWQDDLSK
WKTRRKSVNSDIVKKKEEREKIEQITVSGNRRSKTFKEMQEERENKSRNSIGSRLGSLSY
PDNDDVFDGPVIAPRTRTLPPRSYTIDTPYYSSEPSQPSLKEEEPFAAVPAPGRAAFPPT
KQEINILDSPAGSDTTTAITPSLISYSRSSQRAADVPLEKSPVSEYSRTTKTEETTTIVS
SSSSLQKVPEPRGPLLSSQTKVEAPSSGFLYKQQPQLSSMEPKPPGVSRVSASLPRSYQR
LDSARLTSVVAPRPFGTSRISSLSRSSTTDDSHKRVNGDASVSKKSSVPSRYQQFMTSED
EAQSSSAHSSEDEEEEAAETQSLSPVPPPVKSDAPVSPARAKDNSQENYCEMRINLNQKP
NSSRDFGFQAAWDSTGAHVTSIQSGSPAEMCRLQVGDEVLTVNRHKVAEMSYTDWKAYME
EAIQEGSLVMDIRRHGQNNWDRNQLSLPFKSHKTINLTSTDHPILLGSPDTNIINPSLDF
TSRISTGTLQSKEGPANPVLIVSDLESPRLTQDLASNRVNGSFHEKSVTMRNKESEPISL
KNLKRRSEFFETGGSEAVLPEIPVPPITPSSSSRWSWDPEEERRRQEKWQKEQERQLQEK
YKRDQEKLQEEWQKAQEEIAKNKDQQELTKLGRLEGNSRSISPFSSLPQVNQATTTLWEE
EERKRKEEHERQRQAEERERQRQAEERERQRQAEEQERQRQAEERRKREEEEAQELQRLQ
EERERKEKERKERQEEERKERQEEERKRREEELRWQRRREEEREEERRRQEAVEQQRRER
ERAFQQQQQKQQWAANVQPPLSYTDRIKSKSSPQLDEEERPQRRGVYVQPRGIAHWLLEE
QLRIACDRHAQSQQAASQLEMERRNILSAMRYREPERVTGSGLDERKGQQALSQSELERQ
QILNEMKKKTSLLTDSSWIRQQSSGFASNKESDVPPMRRGESLDNLDASYNSWRSSWTPR
SNSYAPNYTRPHSALSGSTSFYSSGSATQRPSSTLPSSYSMGSLQSGAGTSSSLRSWRTP
SPSFSSSTTSPEPTSEAGVPQQRSRSVSGKKVCTFCDTPLGKGAAMIIESLGLCYHLGCF
KCIECKSNLGGSEAGAEVRIRNKQLYCNTCYMRFKSGQPTSM
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgcgaacagtccaacatcagctgcgacgaagccttcgtggaggcgcagcga
tggatcgagggagtaaccaagaaaaaatttgggagcaacaacttccgatcagcactggag
aatggcgtgctgctgtgcgagctgatcaacaagataaggcctggtatcataaagaggatt
aaccggctgcccacacctatcgccggactggacaacctcaacgtcttcctcagggcctgt
gggaagcttggattaaaagaagcacagctctttcaccccggagatcttcaggacttatcc
acaagagttacagtcaagcaccaggagactgacaggaggctgaaaaatgtgttgatctcc
atttactggcttggtagaaaagctcagtgcgacaattcctatgatgggccttacctgaac
ttcaaggcctttgaaggattattgggtacagcactttacaaggctctgcaggagtcgtcc
actcagaaaggcagcaacgtcagggacagcggttttggagatagctggtactcagagcga
gaggagctctaccaactgagaggaggcggaggaggcggacacaggagcgacgactccctg
gacagtttggactctttgggttcccgacctcacagcatctcctctgacaccactcttaaa
ggcagcagtgagggttgttgcagtgacactgaggcagactctatctacagcatggctggg
aacaaggacaccctcagttaccgccggtcagttgtcatcacgcccaagaccgccgcccag
tttaaccagttcctgcccactaaggacaaatctacagcttacgtccctgctcccctgcgg
aagaaacgggccgaacgcaatgacgacaatcggcgcagctgggccaaccccatttacacc
gaggatgatggcagactcaccagacaacaacaaatggaagagagtatcgacgggagtaaa
tcaacaagtgatatccagactgacacagccatcctccggcaagcacgctatgaggagctg
cagaagttccgagagcagataaaggagagtgacgataagtggcaggatgacttgagcaaa
tggaagacccggcgcaagagtgtcaactctgatatagtgaagaaaaaagaggagcgtgag
aagatagagcagattaccgtcagcggtaacagaaggtccaagaccttcaaggagatgcaa
gaggagagagaaaataaaagcagaaacagcattggcagtcgtcttggatctctctcttac
ccggacaacgacgacgtatttgacggacctgtcattgcccctcgtacccgtacccttcct
cccaggagctacactattgacactccttactattcatctgaaccatcccagccttctcta
aaagaagaagaaccctttgctgctgtcccagcccctggcagagccgctttcccacccaca
aaacaggaaatcaacattttggatagccctgcaggcagcgacaccacgaccgccatcact
cccagtctcatttcctacagccgcagctcccagcgtgctgcagatgtacctttagaaaag
agcccagtctcagaatactccagaacaaccaagacagaggaaaccaccaccattgtctcc
tcttccagctccctgcaaaaggtgccagagccaaggggcccattgttgagctcacagacc
aaggtggaggccccctcctctggttttctgtacaaacaacaaccgcagctcagctcgatg
gaacccaaacctcccggggtgtctcgggtgtccgcctccctccctaggagctaccagaga
ttggatagcgcacgtttgacctcagttgtcgcaccaaggcccttcgggacctcccgcatc
tcttctctttccagaagctccacaacggacgactcacacaaacgtgtcaatggtgacgcc
agtgtttctaagaagtcatctgtgccgagccgctatcagcagttcatgacctcggaggat
gaggctcagtccagctcagcccatagcagtgaagacgaggaggaggaggcggcggagact
cagagtctctcacctgtccctcctccagtcaagagtgatgctccagtcagtcctgctcga
gccaaagacaacagccaggaaaactactgtgagatgcggattaacctgaaccagaagccc
aacagcagcagagactttggcttccaggcagcctgggactcgaccggtgctcatgtcaca
tccatacagtcaggcagcccagctgagatgtgccggcttcaggtcggtgatgaggtgctg
acggtgaacaggcacaaggtggcagaaatgagctacacagactggaaggcctacatggag
gaagcgatccaggagggcagtctggtcatggatattcgccgtcatggccaaaacaactgg
gacagaaatcaactttccctgccatttaaaagccataagaccatcaatctgaccagtacg
gatcatccaatacttctaggttcccctgatacaaacatcataaaccccagccttgatttc
acctcacgcatctccacgggaacgctgcagtccaaagagggtcccgctaacccagtcctc
atcgtaagtgacctcgaatcacccaggttgactcaggatttggcttccaacagggttaat
ggaagtttccatgagaagtctgtgaccatgaggaacaaagagtcagaacccatatctttg
aaaaacttaaaacggaggtcagagttttttgaaacaggaggatcagaggctgtgttgcca
gagatacccgttcctccaataactccctcatcctccagccgctggtcctgggacccagag
gaggaacgtagaaggcaagaaaaatggcagaaggagcaggaacgccaactacaggagaaa
tacaagcgtgaccaggagaagttgcaggaggagtggcagaaggctcaggaggagattgcc
aagaacaaggaccaacaagagctaacaaagctggggcgcctggaggggaacagccgcagc
atcagcccattctcgtccctccctcaagtcaaccaggccacaactactctgtgggaagag
gaagagagaaagaggaaggaggaacacgagcgccaacgacaggcagaggaacgcgagcgc
caacgacaggcagaggaacgcgagcgccaacgacaggcagaggaacaggagcgtcaaaga
caggcagaggagaggaggaagagggaggaggaggaggcgcaagagctgcagcgtctccaa
gaggagagggagaggaaagagaaggagagaaaagagaggcaggaggaggagaggaaagag
aggcaggaggaggagagaaagaggagagaagaagagctgagatggcagaggaggagagag
gaggagagggaggaggagaggaggcggcaggaggccgtggagcagcagcgcagagagcgg
gagagggccttccagcagcagcagcagaagcagcagtgggctgccaatgtccagcctcct
ctgtcctatacagacaggataaaatccaaatcatctccacagctcgatgaagaagaaaga
cctcagaggagaggtgtgtatgtgcagccgcggggtatcgctcactggctgctggaggag
cagttgaggattgcgtgtgacaggcacgcacagagtcagcaagctgcatctcagctggaa
atggagaggagaaacatcctcagtgccatgagatacagggagccagagagagtgacaggc
agtggactggatgaaaggaaaggtcagcaggctctgtcgcagtctgagctggagcggcag
cagatcctgaacgagatgaagaagaaaacgtcgctgctgacggacagcagctggatacgc
cagcagtcctctggcttcgccagcaacaaggagagtgacgtgccacccatgcgcagaggc
gagtctcttgacaacttggatgcctcctataactcctggcgctcatcatggacacccagg
agcaactcatacgccccaaactacactcggccccactctgccctttcaggcagcacctct
ttttacagtagtggatcagcgacccagcggccttcctccactctgccctcctcctactcc
atgggctccctccaaagcggggcaggaacctcctcatcccttcggtcctggcggacaccc
tcaccctccttttcatcatccaccacttctccagagccaacatctgaggcaggtgtccct
cagcagaggagcaggtcagtgagtggcaagaaagtctgtacgttctgtgacaccccgctg
ggaaagggagcagccatgatcatcgagtcccttgggctctgttatcatttgggctgtttt
aagtgtatcgagtgtaagtcgaaccttggaggatcggaagctggcgctgaagtcagaata
cgaaacaaacaactctactgtaacacctgctacatgcgattcaaaagtggccaaccaacc
tctatgtga
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integrated database retrieval system
