Solea senegalensis (Senegalese sole): 122784478
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Entry
122784478 CDS
T07721
Name
(RefSeq) poly(A) polymerase type 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122784478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122784478
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122784478
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
122784478
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
PAP-OAS1
Motif
Other DBs
NCBI-GeneID:
122784478
NCBI-ProteinID:
XP_043905710
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Position
LG17:complement(289984..296392)
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AA seq
570 aa
AA seq
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MTSCNPLNSQAQPVPKIPKYYGITPPISEDLPTETDTIQTKELIKCLRSYDIFEEDLEHQ
HREDVVKRLESLFTEWLKEMCLEMNVPENVMDNVGGKALPFGSFRLGAYAKGADIDVLCV
GPGFIKRKDFFTSFYEKLKAQEVKNIRAVEEAFVPVIKFIYDGIEVDMVIAMVVRKSIPG
SLNLLDDKILKDMDKYSVRSLNGYRVTEEILLLVPNIQNFQLALIAIKLWAKRRNIYSNM
LGFLCGISLAILVARICQLYPNAAVSTVVIKFFKVYSMWDWSIPVCLRVVVDRYYSLPFW
DPTLNPSDRCHMMPIITPAYPQQNTTFNVSSSTLAVITEEINLGHAITQEILQKKADWSK
LFETPNFFEKYQQYVVLKVTSAEKLHHECVSLVESKIRHLVGLLERNRQISRAHLHTQSF
PGPSQENNKEEVSTQWLIGLLISSDAEIDLSLTIPSFIDTIHSLAQNSKANVDGMSISGM
FTNRDNLHWAMPGDMRTRVSCPDPKPAEVHLRVPNLLEVQLHPAWMSPRLQVAHPNHPTV
ELSDLQPSPSKPVTTVKRPIKLHLLSKRKG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgactagttgcaatccactgaacagccaagctcagccagtgccaaagattcccaagtat
tatgggatcacacctccaatcagtgaagacctgcctacagagactgacacgatccagact
aaagaactgatcaagtgtctcaggtcatatgacatatttgaagaagatcttgagcaccaa
cacagagaggacgttgtgaagagactggagtctctctttacagaatggctcaaagaaatg
tgtttagaaatgaatgtacctgaaaacgtgatggacaacgttggaggaaaagctctacca
tttggctcctttcgtctgggagcttacgccaagggtgctgatatcgatgtcctttgtgtc
ggacctggattcattaagagaaaggactttttcacctccttctatgagaagctgaaagct
caggaggtgaaaaacatacgggctgtcgaagaggcatttgtccctgttatcaagttcatc
tatgatggcattgaggttgacatggtcattgccatggtggtgcgaaagtccattccagga
agtctgaaccttcttgacgacaagattctgaaggacatggacaaatacagtgtcaggagt
cttaatggctacagagtgacagaggaaatcctccttcttgtgccaaacattcaaaacttc
cagctcgctttaatagccatcaagctgtgggcaaaacgtcgtaacatttactcaaacatg
ctgggcttcctgtgtggaatatcattggccatactggtggccagaatctgccagctctac
ccaaatgcagctgtgtccacagtggtcatcaaattttttaaggtttactccatgtgggat
tggtcaatcccagtttgtttgagggtcgtagtggaccgctattacagcctccccttctgg
gatccaacgttaaacccaagcgaccgctgccacatgatgcccattatcaccccagcgtat
ccacagcagaacacaaccttcaacgtgtcttcttccaccttggctgttataacagaggag
atcaaccttggtcacgccatcacccaagaaatactgcagaaaaaagctgactggtccaaa
ctgtttgagacgccaaacttttttgagaagtaccagcaatatgttgtgctgaaggttact
tctgcagagaagctacaccatgagtgtgtcagtctggtggagtctaaaatcagacacctg
gtgggacttctggagcgaaacaggcagatttcccgcgctcatcttcatacacagtccttc
cctggacccagtcaggaaaataacaaagaggaagtgagcacacagtggttgattggactt
ctcatcagttcagatgcagagatagacctgtccttaaccatcccttcattcattgatacc
atccacagcctggcccagaactctaaggcaaatgtagacgggatgtccatatcaggcatg
ttcaccaacagggataatcttcactgggcgatgcctggtgacatgcggacaagggtttcc
tgtccagacccaaagcctgcggaagttcatctgagggttccaaacctgttggaggtccag
ctccatccagcgtggatgagtcccaggctgcaagtggctcacccaaatcatcccactgtt
gagctgtctgacctgcagcccagcccctccaaacctgtaacgactgtgaaacgccccatc
aagctacatctgctcagcaagcgaaagggttga
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