Solea senegalensis (Senegalese sole): 122784535
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Entry
122784535 CDS
T07721
Name
(RefSeq) interphotoreceptor matrix proteoglycan 1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssen00536
]
122784535
Glycosaminoglycan binding proteins [BR:
ssen00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
122784535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Cornifin
DUF445
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
122784535
NCBI-ProteinID:
XP_043905775
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All DBs
Position
LG17:complement(20363753..20391032)
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AA seq
1660 aa
AA seq
DB search
MLLGLGLVLFFASLAPCATGIKENDARLRPGVPADAGASTRLVELLTVSTYAQSSGSDVG
KPRAKRSVFIHSGVKICPEESVSEVLASHQAYYQLRVCQEAVWEAFRIFLDRIPGTAEYQ
RWVHTCQHESLCISDLAKNFSGSEEHVRLVQRRMSRLRDRRPPPPPRESASPPAATLKLP
DIKGSDVQTIDSTETPTVLTFTVHLTPVSSSPDQDLEETQSEEEVKVEEEEEKKKVEEVE
EKNEEEDPELPNVVPESPLQRVLEFSIDLVDPGYRDLLDDPDSPQYVDLAHHLQDQMQHV
FDKLPGFETINVLRISETQDTDGSGGISVLYSLVFDVTSPEINPGENSEAPTNSPELSAD
SALRAMVTEALREEASLPIDLDSLNFEPEVSLLPAFTSSSSVEVVNKSSEPDSHNEFEVV
TEEPEVGKPRLPVPLTPLEKENALVTLLDPTALPDDVMAVTEFRSDAPPTREDLIDESEA
INVGEPSSEGGEEEKEESLIITHEIETIRHDETAELVREYIPTPAVIFQLETEASYISLS
PNLISEEDLVPVDEDSHSPGVDVDFTTTTAILLTTTASTKEALSSLGQAVTTLSALTGQP
PTELTLRLQEADQANALPDEEGVVVETGIELQEPERELEVKANEGVFEVLQPNPKQPENF
DAEEAKLKVSEEVGASEPEGDPAVESPPKEVSPEVSDTEEMVVEDLTEGQEEGVEFLQPE
EDITEIAEEGIVDMSSPTSEPVDIQPKVPEEFLLEVSNNRLPEVAERTVPEVVEETVPEV
VEKTVPEVAEETVPEVVEETVPEVVEETVPEVADETVPQVAEETVPEEMVHKVGEKTIPE
VAEETVPEVAEETVPEVAEVLQTITEVEETKEVAEGTIPEVAEETVPEVGEVMVLDVVEE
TVPEVSEETAPEVVEETVPEVAEKIAPEVAEETVPEVAEKTVAEVAEKMVPELAEERLPA
VAKESVPKVVEKTVPEVAEETVFEFTEETVPEVAEKTVPEVAEKMVPEVAAETVPEVEEE
LVTELTEELVTELTEEMVTELAKETVREVSEEAVEDIPDVPTPDEGVVDSLESKPELLPK
GENKFTEVTESTVVKVESVEPEKEQEVVSEPSDKVVEVVELGKDSDETPEEPVDISEPKL
PSETQPQEMEENPEPEEDMIEISLPVEVPGVSEPESSDTVTVQVLEPEEEDVDVPEQNPE
EEVVEILDPETKEYITEPPAESIKVLRPLDGRKGLHFGADTIQVVEDNEVLEYHFDVNNL
PDVPANDSRPSVTTEEAEDNLEFETTSITAEVAASDRRDTTENIKDQPEATQESDSSPER
DISATAPPVSHSLPSPPATSASEVSSSSPTPDSGLFEVAERTVIPSEFDLTESELNETAA
VVTDEDLEETQQQGGGESQTSSPAPAAGVTGQKDLSVELEETDVVTTEANEPLHEGSGFM
AAGDDVTTPTPTLRYLTTPSMTAASHGRELVVFFSLRVTNMNFSEDLFNKTSPEYRSLEN
TFLDMLLPYLQANLTGFKKLEILNFRKGSVVVNSKMKFAKSVPYNVTEAVHGVLEEFCSA
AARNMHIDIDTRSLDIEPADRADPCKFLSCDDFSRCQVNVRTQEAKCVCEPGFLSVDAQP
CQSVCVLQPNYCSTGTCHIVPGHGAICRRMRRSSALGLTS
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgggccttggactcgtgttgttcttcgcttcgctcgctccatgcgccactgga
attaaagagaatgacgcgaggctgcggccgggagtcccggcggacgccggcgcctccacg
cgcctggtggaactcttgacggtgtcgacatacgcccaaagttcgggttctgacgtggga
aaacctcgagccaagaggtcagtgttcattcactccggagtgaagatctgtcctgaagag
agcgtcagtgaagtgctcgccagccaccaggcgtactaccagctcagagtttgtcaggag
gcggtgtgggaggcgttcaggatcttcttggacaggattcccgggacggcggagtaccag
cgatgggttcacacgtgtcagcacgagtcgctctgcatctccgacctcgccaagaacttc
agcggctctgaggagcacgtgagattagttcagcggaggatgagtcgactgagagaccgg
aggccgccgccgccgccgcgagaatcagcgtctcctccggctgcgacgctgaaactcccc
gacatcaaaggttcagacgttcagacgatcgactccacagagacaccgactgtcctcacc
ttcaccgtccatctcactcctgtgagctcctcaccagaccaggacctggaagaaacccag
tctgaggaggaggtgaaggttgaagaagaggaggaaaagaagaaggtggaagaagtggag
gagaagaatgaggaggaggacccggagcttcctaatgtggtccctgagagtccgctgcag
cgagtgctggagttcagtatcgacctggtggatccgggttacagagacctgctggacgac
ccggactccccgcagtacgtggatctggctcatcacctgcaggaccagatgcagcacgtc
tttgacaaactcccaggatttgaaaccatcaacgtgctgcgaatcagcgagactcaggac
actgacgggtctggaggaatctcggtgctctactctctcgtctttgacgtcacgtcgcct
gaaatcaacccgggggagaattcggaggcgccgaccaacagtccggagttgtctgctgac
tccgccctcagggcgatggtgacggaggctttaagagaagaggcgtccctgcccatcgac
ctggactcgctgaactttgaaccagaggtcagcctcttgccagcgtttacctcctcatct
tcagtagaagtggtgaacaagtccagtgaaccagactctcacaacgagtttgaagtggtc
accgaggagccggaggtgggcaaacctcgtctgccagttcctctcacgcccctggagaag
gagaatgccctggtgaccctgctggatcccacagctctccctgacgatgtgatggcggtg
acagagtttaggagtgatgctccgcccaccagagaggatctcattgatgaatcggaggcg
attaatgtgggtgagccatcgagtgaaggcggagaggaggaaaaagaggaatcgctcatc
attacacacgagattgagaccattcgtcatgatgaaactgccgaacttgtgagagagtac
atcccgaccccagcggtgatttttcagctggagacggaggcttcatatatcagcctgtcc
cctaacctgatatcagaagaggacctagttcctgtagacgaggacagccacagtcctggt
gtggatgttgattttactaccactactgccattttattaaccaccacagcctcaaccaaa
gaggcactgtctagtttgggacaagccgtcacaacactctctgccctcacaggccaacca
cccaccgagttaacactccgtcttcaagaagctgaccaggcaaatgctcttccagacgag
gagggagttgttgtagaaactggaattgaactgcaagaaccagagagagagttagaggtc
aaagctaatgaaggagtgtttgaggttttgcagccaaatcctaaacaacctgaaaacttt
gatgcagaagaagctaaattaaaggtgtcagaggaagttggtgcttcagagccggaagga
gaccctgcagtagaatctcctcctaaagaagtgtcacctgaggtttcagacacggaggag
atggtagttgaggatttgacagaaggacaggaagaaggagttgagtttttgcaaccagaa
gaggacataactgaaattgccgaagaaggtatagttgacatgtcaagtccaacttcagag
cctgtggatatacaacctaaagtacctgaggaatttttactggaggtctccaataatagg
ctaccggaggtagcagagagaacagtacctgaggtagtagaggaaacagtacctgaggta
gtagagaaaacagtacctgaggtggcagaggaaacagtacctgaggtagtagaggaaaca
gtacctgaggtagtagaggaaacagtacctgaggtagcagatgaaacagtacctcaggta
gcagaggaaacagtacctgaggaaatggtacacaaggtgggagagaaaacaatacccgag
gtagcagaggaaactgtacctgaggtagcagaggaaactgtacctgaggtagcagaggta
ctacagacgattactgaggtagaggaaaccaaagaggtagcagagggaacaatacctgag
gtagcagaggaaacggtacctgaggtaggagaggtaatggtacttgatgtagtggaggaa
acggtacctgaggtatctgaggaaacagcacctgaggtagtggaggaaacggtacctgaa
gtagcagagaaaatagcacctgaggtagcagaggaaacggtacctgaggtagcagagaaa
acggtagctgaggtagctgagaaaatggtacctgagctagcggaggagagattacctgca
gtagcaaaggaatctgtacctaaggtggtggagaaaacggtacctgaggtagcagaggaa
acggtatttgagttcacagaggaaacagtacctgaggtagcagagaaaactgtacctgag
gtagcagagaaaatggtacctgaggtagcagcggaaactgtacctgaggtagaagaggaa
ctggtaactgagttaacagaggaactggtaactgagttaacagaggaaatggtaactgag
ttagcaaaagaaactgtaagggaggtttctgaggaagcagtagaagatattcctgatgtt
ccaacaccagatgaaggtgtggtcgactctttggaatcaaagccagagttgttgcccaag
ggggaaaacaaatttactgaggtgacagaatcaacagttgtcaaggttgagagtgtagaa
ccagagaaggaacaagaagtagtttctgaacctagtgataaagtggtagaagttgtggaa
ctggggaaagattctgatgaaacaccagaggagccagttgacatttcagaacccaaacta
ccttcagaaacccagccacaggagatggaggaaaatccagaaccagaggaagatatgatt
gaaatttcactgccagttgaagttcctggggtttcagagccagaatcaagtgacactgta
acagttcaagttctagaaccagaagaggaggatgttgatgtacccgaacaaaatccagag
gaggaggtggttgagattttagatccagaaacaaaggaatacattactgagcctccagca
gaatccattaaagtccttcgccccttagatggtaggaaaggccttcactttggtgctgac
actattcaggttgttgaagataatgaggtccttgagtatcattttgatgtcaataattta
cctgacgtcccagcgaacgattccaggccttcagtgaccacagaggaagcagaggacaat
ctggagtttgagacaacctccatcactgcagaggtggcagcttcagatagacgagacaca
acagagaacatcaaagaccagccggaggcgacacaagaaagtgattcctccccggagaga
gacatcagcgcgacagcaccgccggtttcacactccctcccttcacctccggctacgtct
gcttctgaagtttcctcgtccagcccgactccagactctggactctttgaggtagcggag
cgaactgtgatcccctccgagtttgatctcacagagtcggagctaaatgagactgctgct
gtcgtcacagatgaagacttagaagagacacagcagcagggaggaggcgaaagccaaacc
agctctccggcgccggctgctggcgtcactggccagaaagacctgtccgtggagctggag
gaaacagatgtggtgaccacggaggcaaatgagccgctgcatgagggtagtggcttcatg
gcagcaggtgacgacgtcacaacccccactccgacactgcggtacctgaccacgccctct
atgactgcagcgagccatggccgggagctggtggtgttcttcagcctgcgagtcaccaac
atgaacttctctgaggacctcttcaacaagacgtcgcccgagtacagatccctggagaac
accttcctcgacatgctgctgccgtacctgcaggccaacctgacgggcttcaagaaactc
gagatactcaacttcaggaagggcagcgtggtcgtcaacagcaagatgaagttcgccaag
tctgtgccgtacaacgtcaccgaggccgtccacggcgtcctggaggagttctgctccgcc
gccgccaggaacatgcacatcgacatcgacacacgctccctggacatcgaaccagctgac
cgagcagatccctgtaagttcctgtcgtgtgacgacttttctcgctgccaggtgaatgtt
cgtacacaggaagcgaagtgtgtgtgtgagccaggcttcctgtctgtggacgctcagcca
tgtcagagtgtttgtgtcctgcagccgaattactgcagcacggggacatgtcacatcgtt
cctggacacggtgccatctgcagacgcatgcgccgctcgtcggcgctcggcctgaccagt
taa
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