Solea senegalensis (Senegalese sole): 122784551
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Entry
122784551 CDS
T07721
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122784551 (hmbox1b)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122784551 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_31
HTH_37
HTH_24
NOC3p
Motif
Other DBs
NCBI-GeneID:
122784551
NCBI-ProteinID:
XP_043905793
LinkDB
All DBs
Position
LG17:3611689..3630543
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AA seq
519 aa
AA seq
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MSEFSEEPRFTIEQIDLLQRLRRSGMTKQEILHALDTLDRLDREHGDKFGRRTSSSSSSS
SSFGVGGASSCTNNSASNANTASHNNNNTASATTTSSTTCNGNNNAISVEGSAGDHSAAA
ASSTTSKISTATQTQYGSGGGLSPSPSNSYDTSPPPGPPPPSAILPSPVSLVALSQNGRD
SLAATPNGKLSPPRYPVNSAAAARAFGFEATEEDLDIDDKVEELMRRDSSMVKEEIKAFL
GNRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRPA
PLPLEEMEWRQTPPPLTTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIA
NACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGH
SNSDDIDGNDFSEQACDLPYFDKRPLSRPFGLYRLEPTSPTQITSRPAVRFQDDGAAHSE
HQDPISLAVEMAAVNHSILALSRAGGVPNDIKTESLEDE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttagcgaggagccgcgcttcactatcgagcagatagatctgctgcagcgg
ctgcgtcgctccggcatgaccaagcaggagatcctgcatgcacttgacactctggaccgg
ctggaccgggagcatggcgacaagtttggccgccgcacctcttcttcctcctcctcctcc
tcctcttttggagtaggcggagcaagcagctgcaccaacaactctgcctctaatgcaaat
acagcatcacacaacaataacaacacagcctcggcaaccaccacctcttccacaacatgc
aacggcaacaacaatgccatcagcgtcgaggggagtgctggcgatcactcagcagccgcc
gcctcgtccacaacctccaaaatctccaccgccacacagacgcagtacggtagcggcgga
ggactctcgccatctcctagcaacagctacgacacctccccgcctccagggccgccaccg
ccctctgcaatcctgccatcgccagtcagcttggtggcgctgtcacagaacgggcgtgat
agcttagcggccacgcccaacggaaagctttctcctccacgatatccagtgaacagtgcg
gctgcagcgcgggctttcgggtttgaagccacagaagaagacctggatatagatgacaag
gtggaggagctgatgaggagggacagcagcatggtgaaggaggagatcaaagcgttcctg
gggaacaggaggatctctcaggcagtagtggcacaagttaccggcatcagccagagcagg
atctcccattggctgctgcagcatggctccgacctgagtgagcagaagaagagggccttc
taccgctggtacacgctggagaaaacgacaccaggtgccaccctcaacatgcggccggcg
ccgttgcccctggaggagatggagtggagacaaaccccgccccccctcaccaccgcccct
ggtaccttccggctgcgtcgtggtagtcgcttcacttggaggaaagagtgtctggctgtg
atggagagctacttcaacgacaaccagtacccagacgaggccaagcgggaggagattgca
aacgcctgcaacgctgtgattcagaaaccagggaagaagctgtcagatctggagagggtc
acctcgctgaaagtttacaactggtttgccaatcgtcgcaaagagatcaagagacgggct
aacattgaagccacaatcctggagagtcatgggatagacgtccagagtcctggaggacac
tctaacagcgacgacatcgatggcaacgacttctcagagcaggcctgtgaccttccctat
tttgacaagagacctctcagccgaccgtttggcctttaccgactggagcccacctcccca
acccagataacatctcgacctgccgtacgttttcaggacgacggcgcggcacacagcgag
caccaggaccccatctctctcgccgtggaaatggccgccgtcaaccactccatcttggcc
ctgtccagagccggcggcgtccccaacgacatcaagacggagtccctggaggacgaatga
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