KEGG   Solea senegalensis (Senegalese sole): 122784561
Entry
122784561         CDS       T07721                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03082  ATP-dependent chromatin remodeling
ssen03083  Polycomb repressive complex
ssen04110  Cell cycle
ssen04330  Notch signaling pathway
ssen04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122784561
   03083 Polycomb repressive complex
    122784561
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    122784561
   04350 TGF-beta signaling pathway
    122784561
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    122784561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssen03036]
    122784561
Enzymes [BR:ssen01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122784561
Chromosome and associated proteins [BR:ssen03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     122784561
   HDAC complexes
    Sin3A-HDAC complex
     122784561
    BRAF-HDAC complex
     122784561
    REST complex
     122784561
    SHIP complex
     122784561
    MiDAC complex
     122784561
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122784561
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122784561
  Chromatin remodeling factors
   NuRD complex
    122784561
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122784561
NCBI-ProteinID: XP_043905811
LinkDB
Position
LG17:complement(892912..905771)
AA seq 473 aa
MAYTAAGGTKKKVCYFYDGDVGNYHYGQGHPMKPHRIRMTHNLLLNYGLYKKMEIYRPNK
ATGDDMTKYHSDDYIKFLRSIRPDNMSEFSKQMKRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKNHQRVLYVDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QLFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHARCVEYIKSFNLPMLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFSPDFKLHISPSNMTNQNTREY
TDKIKQRLFENLRMLPHAPGVQMLAIPEDAVPDDTVDEDMDDPDKRLSIRATDKWIACDE
EFSDSEDEGEGGRRNVSSPKKGMKRPRVDDEKKETEEKKSEIKEEEKTQDVSA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggcctacacggctgcgggtgggacgaagaagaaggtctgctacttctacgacggtgac
gttgggaattatcactatggacaggggcatcccatgaaaccacatcggatccggatgact
cacaacctgctcttgaactatggactgtacaagaaaatggaaatatatagaccaaacaaa
gccacaggagacgacatgacaaagtaccatagcgatgactacatcaagttcctccgttcc
atacggcctgacaacatgtctgagttcagcaagcagatgaagcgcttcaacgttggagag
gactgtcctgtgtttgacgggttgtttgagttctgccaactctctgccggaggctctgca
gctggctcagtgaagctgaaccgacaacagaccgacatcgcggtgaactgggctggagga
cttcaccacgcaaagaaatctgaagcgtccggattctgttacgtcaacgacatcgtgctg
gccattctggagctgctcaagaaccaccagagggtgctgtacgttgatatagacatccac
catggggatggagtggaggaggccttctacaccacagacagggtcatgactgtgtctttc
cataaatatggggagtacttccctggaactggagaccttagggatattggagcgggaaaa
ggcaaatattacgctgtcaacttccctctgcgggacggtattgatgatgagtcgtatgag
caactcttcaagcctgtgatggctaaggtgatggagatgtaccagcccagtgctgtggtg
cttcagtgtggtgctgactctctctcaggagaccgccttggctgctttaacctcactatt
cggggacacgcccggtgtgtggagtacataaagtccttcaacctgccaatgctcatgctc
ggtggaggaggatatacgatccgtaatgtggcccgctgctggacctatgaaacagctgtg
gctctggacacggaaatccctgacgaattgccctacaatgactactttgaatattttagc
cctgacttcaagctgcacatcagcccctccaacatgaccaaccagaacacacgggagtac
acggacaagatcaaacagcggctgtttgagaacctgcggatgcttcctcatgctcccggt
gttcagatgctggccatcccagaggacgctgtcccagacgacaccgtggacgaggacatg
gatgaccctgacaaacgcttgtccatccgtgccacagataagtggatagcctgtgatgaa
gagttctccgactccgaggacgagggcgaaggtggcaggaggaacgtgtccagtcccaag
aagggaatgaaaagacccagagtcgatgacgagaagaaggaaacagaagagaagaaatct
gagataaaagaggaagagaaaacccaggacgtcagtgcttag

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