Solea senegalensis (Senegalese sole): 122784660
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Entry
122784660 CDS
T07721
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122784660 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122784660 (gtf2f1)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122784660 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
122784660
NCBI-ProteinID:
XP_043905887
LinkDB
All DBs
Position
LG19:13854052..13859336
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AA seq
534 aa
AA seq
DB search
MTSLGSSSSSATEYTVRVPKNTSKKYNIMAFNAGDRVNCSTWTQARMERDMSARRIYGEE
ETTEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQEHGEDEGDEAEKSGKKKKKGGRGGDLCIHDLEDDLGMSSDDSDSSMGDDGENKSK
VKKNTGKGAKKKKPKSSDKEALEDSDDGDYEGLEVDYMSDESSSDEEPEKGKPNKGEELP
KGIDEASESEEESEEEKQNDAEEKEEEEEEEGKKTPVQIEKKKKKDSSGESDTSDDSDIE
GETASALFMGHVTQKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQ
GKRQIQGPGTDSPAAKRLKMEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYL
IRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINDKMHFYLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactggggagcagcagttcctcagccacagaatacactgtgcgtgtccccaaa
aacaccagcaagaagtacaacatcatggccttcaatgcaggagacagagtcaactgttca
acttggacacaggctcgaatggaaagagacatgagtgctcgtcgtatatatggggaggaa
gagacaacagaaggtgcagccggaagtgagtttggcaaaaaacagcgtgaggaagcacga
cgcaagaagtttggaattgtgacacgtgaattcaaagttgaggaccagccctggatcctc
aaggtcaatggcaaggctggaaagaggtttaaaggtctgaagaagggcggcgttacagaa
aatgcatcatactacatcttcacacagtgtcccgatggagcgtttgaagccttccctgtt
catggctggtacaactttaccccacaggccaaacaccgaactctcactgctgaggaggct
gaggaggagtggggcaggaggaacaaggttgtgaatcacttcagcatcatgcttcagagg
cgtctccgggagcaggagcacggtgaagatgagggagatgaggcagagaaatcggggaag
aagaaaaaaaaggggggcagagggggtgacctgtgtattcatgacctagaggatgacctg
ggcatgagcagtgatgacagtgacagcagtatgggagatgatggtgagaacaagtctaag
gtcaagaaaaacacaggtaaaggagctaagaagaagaagccaaaaagcagtgataaggag
gctttggaagacagtgatgatggtgactacgagggtctagaggtggattacatgtcagat
gaaagcagctcagatgaagagccagaaaaaggaaagcccaacaaaggagaggaacttcct
aaaggcattgatgaggcatctgaaagtgaagaggagagcgaggaagaaaaacagaatgac
gctgaagaaaaagaggaggaagaagaggaggaagggaagaaaaccccagtccaaattgaa
aagaagaagaaaaaggacagcagcggagagtcagacacctcggatgacagcgacattgag
ggagagacggcttctgctttgttcatgggacatgttactcagaaaaagcgcactccacca
aaacgtggagggcgtggctctgcaggcagctccaggactggcagtcgccctgggacacca
tccatagactccgcctccacttcaaatacactgcgtgcagctgctagcaagttagagcaa
ggtaagcgacagattcagggtcctggcactgactcaccagctgcaaaaaggctgaagatg
gagcctagcagtcagagtcctgttccttctgggaagagtacgcctcaacctccatcggga
aaatccaccccaagctccagtgatgtgcaactgacggaggaagctgtgcggcgctatctg
atccgtaaaccgatgacgaccaaagatctgcttaagaaatttcagaccaagcgcaccggc
ttgagcagtgagcagactgtcaacgtgctggcacagatcctgaaacgccttaatcctgag
cgcaagaatattaatgacaaaatgcacttctacctcaccgaataa
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