Solea senegalensis (Senegalese sole): 122784937
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Entry
122784937 CDS
T07721
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04080
Neuroactive ligand-receptor interaction
ssen04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122784937
04081 Hormone signaling
122784937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122784937
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssen03310
]
122784937
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122784937
Nuclear receptors [BR:
ssen03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
122784937
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122784937
NCBI-ProteinID:
XP_043906313
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Position
LG19:complement(19145052..19244562)
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AA seq
413 aa
AA seq
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MSNKQDSNSSEGDDKGWPDVPKRKRKNSQCSVKSMSALSVSVPGYIPSYLEKDEPCVVCG
DKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGCCIIDKITRNQCQLCRFKKCIS
VGMAMDLVLDEAKRVAKRRLIEENREKRKKEEMVRTLQVRPEPDTAEWELIRMATEAHRH
TNAQGSSWKQKRKFMPDDIGQGPMVPTSDGDKVDLEAFSEFTKIMTPAITRVVDFAKKLP
MFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVKREQLKNGGLGVVSD
AIFDLGKSLAQFNLDDTEVALMQAVLLMSSDRSGLTSIEKIEQCQEAYLLAFEHYINHRK
HNIRHFWPKLLMKVTDLRMIGACHASRFLHMKVECPSELFPPLFLEVFEDQEV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaagcaggatagcaactcgtctgagggggacgataaagggtggccagatgtg
ccaaagagaaagaggaagaacagccagtgttcggtgaagagtatgtctgctcttagcgtc
tctgttccagggtacatccccagctacctggagaaggacgagccgtgtgtggtgtgcggg
gacaaggccactggctaccactaccgctgcatcacctgcgagggatgcaagggtttcttc
cgaagaaccatccagaaaaacctccacccatcatactcctgtaaatatgaaggctgctgc
attattgacaagatcacccgcaaccagtgtcagctgtgccgctttaagaagtgcatctct
gtgggcatggccatggacttggtgctggatgaggccaagcgagtggccaagcggcgtctg
atcgaggaaaaccgagagaaaaggaagaaggaggagatggttcggacgctgcaggtgagg
ccagagccggacacagcggagtgggagttgatcaggatggcgaccgaggcccaccggcac
accaacgcccagggatccagctggaaacagaagcgcaagttcatgccggatgatatcggc
caaggtccgatggttcccacctccgatggtgataaagtggacctggaagctttcagtgag
ttcaccaagataatgacacccgccatcacacgtgtcgttgactttgccaagaaattgccc
atgttctcagagctgccttgtgaagaccagatcatcttgctgaaaggctgctgcatggag
atcatgtcactgcgcgccgccgtgcgctacgacccagagagcgagacgctgacgctgaac
ggtgagatggcggtgaagcgcgagcagctgaagaacggcgggttgggagtggtctcggac
gccatctttgatttgggcaagagtctggctcagtttaacctggatgacacggaggtggcg
ctgatgcaggctgtgctactcatgagctcagatcgctcggggctgaccagcatagaaaag
attgagcagtgccaagaggcgtacctgctggcgttcgaacactacatcaaccatcgcaag
cacaacatccgccacttctggcccaagctgctgatgaaggtaacagacctgcgaatgatc
ggagcgtgccatgccagtcgcttcctccacatgaaggtggagtgtcccagcgaactcttt
cccccgctcttccttgaggtgtttgaggaccaggaagtgtaa
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