Solea senegalensis (Senegalese sole): 122784940
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Entry
122784940 CDS
T07721
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122784940 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122784940 (nup85)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122784940 (nup85)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122784940 (nup85)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122784940 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
122784940
NCBI-ProteinID:
XP_043906318
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Position
LG19:complement(13209820..13215441)
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AA seq
663 aa
AA seq
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MFYSANNVLSPMEEVDVEPAITNIPAASHSKHLGFAWGPGDILVYETLYKTIGSTGSGCA
FIHEVRKDEDIYSPILRKLFNESHHIFVGLQTIREDLPSKNKKSQFVSISKNYRSVIRAC
MEELQQVAVSTKDAQVAMQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLLLHLLDWVRL
HKADVDEKARDVLQSESPAEHHDYWDVVVSYVLQGRLEEARQMLVKQATLHPAARNMYKL
MDTLLSKMPFYNPGGTQTLTEFDVKWRHWHEEVDRCLQDSSFASNQHLELICKILVGDED
TLLTQKELLSTWYHFLVTRLLFCHPTVKPTEIHYYAQSCLSMFLDSRSVPEPLDSILLAA
FEFDIHQVIKDCSIALNNWWFVSHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFT
HHSLWQLAVDYFDNCPEFGRVYLELQIERVPLDTERKALKVLRVCEQRQMSEQVRSICKI
MAMRALRNNRLGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLS
DRLTFLGKYREFHKLYGEKSFREAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIF
SADQTYELMFCLEELTSSMNTTAPTRDKPMQEEDLELTKVELLRLALARNLAMAIVKEGT
VET
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttttattccgctaacaacgttttgtccccaatggaggaggtggatgtggagccggcg
atcactaatattcctgcagccagtcatagcaagcatttgggattcgcatggggtcctggt
gacatccttgtatatgagaccctgtacaaaacaataggtagtacaggctctggttgtgca
ttcatccatgaggtcaggaaagatgaagatatatattcccctattttacgcaaactcttc
aatgaatcacatcacatctttgttgggctccagacgattagggaggaccttcccagcaaa
aacaaaaagtctcagtttgtcagcatcagtaaaaattacagatctgtgatacgcgcttgt
atggaagaacttcagcaagttgcagtttcaacaaaagatgcacaagtggccatgcaatat
ggaaatcaggtgtccattctgttggctgtagagctcatctggaatctgtgtgaagtgctt
ttcatcgatgctgcgcctgcgggttccctgttgctccaccttctggactgggtgaggtta
cataaggctgatgtggatgagaaggccagagatgtgctgcaaagcgagagtcctgctgag
caccatgactactgggatgtggtggtgagttatgtgctgcagggtaggttggaagaagcc
agacagatgctggtgaagcaggccactctgcatcctgctgccagaaacatgtacaagttg
atggacactctgctcagcaagatgcccttctacaatcctggtggcacccagacattaaca
gagtttgatgtgaagtggagacactggcacgaggaggtggaccgctgcttacaggacagc
tcgtttgccagcaaccaacatctggagctcatctgcaagatcttagtgggggatgaagac
actttgctcacacaaaaggaattgctgagcacttggtaccacttcctagttactcgactg
ctgttctgccacccgacggtcaaacccactgagatacattactatgcacagtcatgcttg
agcatgtttctggactcacggagtgtcccagagccactggacagcattttactggctgcc
tttgagtttgacattcatcaggtcatcaaggactgcagcattgctctcaacaactggtgg
tttgtatcccatttgacagacctcttggatcactgcaaactcctgcagtctcacaatcta
cactttggctccaacttgagagagtttctcctgttagaatatgcatctggcctcttcacc
catcacagtctttggcagttggctgtggactactttgacaactgtccagagtttggtcgc
gtttacctggagctacagattgagcgagttcctttagacacagagcgcaaagccctcaag
gtgctcagggtctgcgagcagaggcaaatgtcagagcaagtgcggagtatctgtaagatc
atggctatgcgggcactgaggaacaacagactgggctctgctctgtcctggagcatcagg
gccaaagatgctgcctttgccaccctcatttcagagaggttcctacaggattactgtgcg
aaagggactttctctgatctggatctgatagacaacttgggtccggctatgctgctcagt
gacaggctgactttccttggaaagtacagagagttccacaagttatacggagaaaagagc
ttcagggaggcagcaaagctgctcctctccctcatgacggccaagatcgccccccgtagc
ttctggatgactctgctgactgacgccctgccgctgctcgagcagaaagaggtgatcttc
tcagcagaccaaacctatgagctgatgttctgtttagaggagctgacctcctcaatgaac
accacagctcccactagagacaagcccatgcaggaggaagacctagagctgactaaagtg
gagcttctgagactcgctctggccagaaacctggctatggctatagtcaaagagggaact
gtggaaacatga
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