Solea senegalensis (Senegalese sole): 122785005
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Entry
122785005 CDS
T07721
Symbol
chaf1b
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122785005 (chaf1b)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122785005 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR3_2nd
EIF3I
WDR55
Beta-prop_Aladin
CAF-1_p60_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
B-prop_COPA_B_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
eIF2A
Beta-prop_WDR41
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
122785005
NCBI-ProteinID:
XP_043906443
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Position
LG2:complement(14518996..14526716)
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AA seq
615 aa
AA seq
DB search
MKVVTCEIAWHNKEPVYSMDFQHSSDGRFHRLATAGVDTTVRLWRVEMGSDGKAAVEFLS
NLARHTKAVNVVRFSPNGELLASGGDDSAILLWKLNDCKEPEQAPVFQEDEDAQLNKESW
SVIKTLRGHIEDVYDICWTGDGNFMVSGSVDNTAIMWDINKGQKLCILNDHKSYVQGVTW
DPLGQYVATLSCDRTMRVYNTHTKKKAFCISKMSSGPLAEGEAKQYRIFHDDSMRSFFRR
LSFTPDGSFLIAPAGCVEIGENIINTTYIFSRKSLKRPIAHLPSPSKATLAVRCCPVYFE
LRTKKGEDGSVETLPNLFELPYRMVFAVASEDAIFLYDTQQTIPFGLVSNIHYHTLSDLT
WSRDGSFLAVSSTDGYCSFLSFFPGELGTPLKEPPTLEMFVPNSGAEKKSKKSSAGRTSS
PGSQPSSSAPTPTSQTSKDTPSFTPPEEKKSTPSTKCKPQPRRITLNTLEGWGKPTSPKT
TAPAAPQTPTAACTSAPSTPQPHIAPLTPTSSSKTQQRITPLTPSTPKVQNSANTPVPTT
PKGITTPKGPTPRRVSLTTVALRSPAVSSLFSTPSSTEKAKHERPSPPTDPVCQPPESKR
PKTSDPPTTSSDTKP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggttacgtgtgagattgcatggcacaacaaggagccagtctacagtatggac
ttccagcacagctctgatggacgcttccatcgactggccacagctggggtggacaccaca
gtcagactatggcgagtagaaatgggctcagatgggaaggcagcagtggagtttctgtct
aatctggccagacacaccaaggctgtcaacgtagtgcgctttagccctaatggagagctg
cttgcatcaggaggagatgattctgcgattctcctgtggaagctcaatgactgtaaggaa
cctgagcaggcacctgtgtttcaggaggatgaagatgctcagctcaacaaggagagctgg
tctgtgattaagacactaaggggacacatagaggatgtatatgacatctgctggacagga
gatggaaacttcatggtgtctggctctgtcgacaacacagctattatgtgggacatcaac
aaaggacagaagctgtgcatcttgaatgatcataagagttatgtgcagggagtgacgtgg
gatcctctaggacaatacgtcgccactctcagctgtgacaggacgatgcgtgtttacaac
actcacaccaagaagaaagctttctgtatcagtaaaatgagctctgggccacttgctgaa
ggagaggccaagcagtaccgaatcttccacgatgacagcatgaggtcgtttttcagacgt
ctatcattcacacctgatgggtctttcctgatcgccccagctggatgtgtggagattgga
gaaaatatcatcaataccacctacatcttttccaggaagagcctcaagaggcccatcgcc
cacttgccatctccatctaaagctacactggctgtgcgctgctgcccagtctactttgaa
ctaagaacaaagaagggagaagatggttcggttgagacgcttcccaacttattcgagttg
ccttaccgtatggtgtttgctgtggcttcagaggacgccatctttttgtatgacacccag
cagaccattcctttcggcctggtgtccaacatccactaccacacactaagtgatcttaca
tggtctcgtgatggttccttcctggctgtgtcctccacagacggctactgttccttcctg
tccttttttcctggggagctgggcactcctctgaaagagccccccacactggagatgttt
gtcccgaacagtggtgctgagaaaaagagcaagaagtcctcagcgggcaggacatcgtct
cctgggtcccagccatcaagctcggccccgactcccacatcccaaactagcaaagacacc
ccctctttcacccccccagaggagaagaagagcacgcccagcaccaagtgtaaacctcag
ccccggaggatcactctcaacactctggaaggttgggggaagccaaccagccctaaaacc
acggctcctgctgcacctcagaccccaacagctgcatgcacaagtgctccatcgactcct
caaccacacattgccccgctgactcccaccagctcctccaaaacccaacaacgcatcacc
cctctcactccctccacccctaaagtccaaaatagcgctaatactcctgtgcccactact
cccaaaggcataaccaccccaaaaggacccaccccaaggagagtatctttgactacagtt
gccctccggtccccagctgtgagttcactcttcagcactccctcctccactgagaaggcc
aaacatgaacgtccttctccacccactgatccagtctgccagcctccagagtccaaaagg
ccaaagaccagtgacccgcccacaacgtccagtgacacgaagccgtag
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