Solea senegalensis (Senegalese sole): 122785119
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Entry
122785119 CDS
T07721
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122785119 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122785119 (utp18)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122785119 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_HPS5
DUF7165
Beta-prop_EIPR1
PQQ_3
WD40_like
Beta-prop_WDR35_TULP_N
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
122785119
NCBI-ProteinID:
XP_043906689
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Position
LG19:complement(18842169..18845094)
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AA seq
526 aa
AA seq
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MADSNVIPLPRTERREAAMKRAKPGRFDPEKEGVKRRRNAESVAALGQQDSGVKLLEELV
FGTEDELLHRLLEEEEEEPTGAAVAEDKDEESPDDEDHQQQQGVARKGVWVDEDDELEED
VDMTHRYRRQLVRGGAEASMSNQKLQQRMKEQFVKVMGGTPSWAESSERKTRKTADDEDD
DDEHDLLTRTGNFVACSDRLPGGVLRMKKCLHANSARPSDDRLTSVHFHPSAQVVLTAGL
DQSLSLFQVDGKTNPKIQSVHLERFPVHRAAFTADGTAVIATSLKNKMFYVYDMMEGRVT
PVHVVRGLNEARVKEFSVCPEGGALLLTGTRGYLHFLTLKTKEVTDSIKVNGDVSGVTFT
RDGSKVFVQSEQGQVYVYDVRRSSRCVSVFSDDGCVRGTSIAASPDGRYLACGSQSGVVN
IYSQEACLNSANPKPVKAVKNLLTSATSLTFNPSSEILAIASRAEDEAVRLVHLSSLSVF
SNFPVAKNKSMFRVSSLDFSPHSGFFSLANNKGHAPLFRLLHYKEF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagtaacgtgattccgctgccgcggacggagcgccgagaagcggccatgaag
agagcgaagcccggcaggtttgacccggagaaggagggggtgaagcggcggaggaacgcg
gagagtgtggcagcgctggggcagcaggacagcggcgtgaagctgctggaggagctggtg
ttcgggaccgaggacgagctgctgcacaggctgctggaggaggaagaggaggagccaact
ggagctgccgtggccgaggataaagatgaagaatcacctgacgacgaggatcatcagcag
cagcagggagtggcgaggaagggtgtctgggtggatgaggatgatgagctagaggaagat
gtggacatgacacatcgttaccgtaggcagctagtgaggggcggagccgaggcatccatg
tccaatcagaagctgcagcagaggatgaaggagcagtttgttaaggtgatgggaggaact
ccatcgtgggcagagagcagcgagaggaagacgaggaagactgctgatgatgaagatgat
gacgatgagcatgacctgctgacgaggacaggaaactttgtggcgtgttcagatcgtctg
cccggtggcgtcctgaggatgaagaagtgtctccatgccaacagcgctcgcccatcagac
gacagactgaccagcgttcacttccacccatccgctcaggtcgtcctgacggccggactc
gaccaatccctgtcgctctttcaggtggatggaaagaccaacccaaagatccagagtgtc
cacctggagcgcttccccgtccacagagccgcgttcaccgccgacggcaccgccgtcatt
gccacgagtctgaagaacaagatgttctacgtttacgacatgatggagggacgagtgacg
ccggtgcacgtggtcagaggtctgaatgaagccagagtcaaagagttctcagtttgtcct
gaaggaggcgctctgctgctcactggaacccgtggctacctgcatttcctcacactcaag
actaaagaggtcactgacagtataaaggtcaatggtgatgtaagcggcgtcaccttcaca
cgcgacggcagcaaagtctttgtccaatcagagcagggacaggtgtatgtgtatgatgtg
cgcagatcgtctcggtgtgtgagcgtcttctcggacgacggctgcgtgagggggacgtcc
atcgctgcgtctcctgacgggcgctacctggcctgcgggtctcagtcgggtgtggtcaac
atctactctcaggaggcgtgtctaaattcagccaatccaaagcctgtgaaggctgtgaag
aacctgctgacctctgccacctccctgacctttaatccctcctccgagattctggccatc
gcctcccgagccgaggacgaggccgtacggctggtccatctgtccagcctgagtgtcttc
tctaacttccccgtcgctaagaacaagtcgatgtttcgagtttccagccttgacttctct
ccacacagcggcttcttctcattggctaacaacaaaggacacgcccccctcttcaggtta
ctgcattacaaagaattctga
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