KEGG   Solea senegalensis (Senegalese sole): 122785119
Entry
122785119         CDS       T07721                                 
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    122785119 (utp18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssen03009]
    122785119 (utp18)
Ribosome biogenesis [BR:ssen03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    122785119 (utp18)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_HPS5 DUF7165 Beta-prop_EIPR1 PQQ_3 WD40_like Beta-prop_WDR35_TULP_N B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 122785119
NCBI-ProteinID: XP_043906689
LinkDB
Position
LG19:complement(18842169..18845094)
AA seq 526 aa
MADSNVIPLPRTERREAAMKRAKPGRFDPEKEGVKRRRNAESVAALGQQDSGVKLLEELV
FGTEDELLHRLLEEEEEEPTGAAVAEDKDEESPDDEDHQQQQGVARKGVWVDEDDELEED
VDMTHRYRRQLVRGGAEASMSNQKLQQRMKEQFVKVMGGTPSWAESSERKTRKTADDEDD
DDEHDLLTRTGNFVACSDRLPGGVLRMKKCLHANSARPSDDRLTSVHFHPSAQVVLTAGL
DQSLSLFQVDGKTNPKIQSVHLERFPVHRAAFTADGTAVIATSLKNKMFYVYDMMEGRVT
PVHVVRGLNEARVKEFSVCPEGGALLLTGTRGYLHFLTLKTKEVTDSIKVNGDVSGVTFT
RDGSKVFVQSEQGQVYVYDVRRSSRCVSVFSDDGCVRGTSIAASPDGRYLACGSQSGVVN
IYSQEACLNSANPKPVKAVKNLLTSATSLTFNPSSEILAIASRAEDEAVRLVHLSSLSVF
SNFPVAKNKSMFRVSSLDFSPHSGFFSLANNKGHAPLFRLLHYKEF
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcggacagtaacgtgattccgctgccgcggacggagcgccgagaagcggccatgaag
agagcgaagcccggcaggtttgacccggagaaggagggggtgaagcggcggaggaacgcg
gagagtgtggcagcgctggggcagcaggacagcggcgtgaagctgctggaggagctggtg
ttcgggaccgaggacgagctgctgcacaggctgctggaggaggaagaggaggagccaact
ggagctgccgtggccgaggataaagatgaagaatcacctgacgacgaggatcatcagcag
cagcagggagtggcgaggaagggtgtctgggtggatgaggatgatgagctagaggaagat
gtggacatgacacatcgttaccgtaggcagctagtgaggggcggagccgaggcatccatg
tccaatcagaagctgcagcagaggatgaaggagcagtttgttaaggtgatgggaggaact
ccatcgtgggcagagagcagcgagaggaagacgaggaagactgctgatgatgaagatgat
gacgatgagcatgacctgctgacgaggacaggaaactttgtggcgtgttcagatcgtctg
cccggtggcgtcctgaggatgaagaagtgtctccatgccaacagcgctcgcccatcagac
gacagactgaccagcgttcacttccacccatccgctcaggtcgtcctgacggccggactc
gaccaatccctgtcgctctttcaggtggatggaaagaccaacccaaagatccagagtgtc
cacctggagcgcttccccgtccacagagccgcgttcaccgccgacggcaccgccgtcatt
gccacgagtctgaagaacaagatgttctacgtttacgacatgatggagggacgagtgacg
ccggtgcacgtggtcagaggtctgaatgaagccagagtcaaagagttctcagtttgtcct
gaaggaggcgctctgctgctcactggaacccgtggctacctgcatttcctcacactcaag
actaaagaggtcactgacagtataaaggtcaatggtgatgtaagcggcgtcaccttcaca
cgcgacggcagcaaagtctttgtccaatcagagcagggacaggtgtatgtgtatgatgtg
cgcagatcgtctcggtgtgtgagcgtcttctcggacgacggctgcgtgagggggacgtcc
atcgctgcgtctcctgacgggcgctacctggcctgcgggtctcagtcgggtgtggtcaac
atctactctcaggaggcgtgtctaaattcagccaatccaaagcctgtgaaggctgtgaag
aacctgctgacctctgccacctccctgacctttaatccctcctccgagattctggccatc
gcctcccgagccgaggacgaggccgtacggctggtccatctgtccagcctgagtgtcttc
tctaacttccccgtcgctaagaacaagtcgatgtttcgagtttccagccttgacttctct
ccacacagcggcttcttctcattggctaacaacaaaggacacgcccccctcttcaggtta
ctgcattacaaagaattctga

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