Solea senegalensis (Senegalese sole): 122785175
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Entry
122785175 CDS
T07721
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00260
Glycine, serine and threonine metabolism
ssen00630
Glyoxylate and dicarboxylate metabolism
ssen00670
One carbon pool by folate
ssen01100
Metabolic pathways
ssen01200
Carbon metabolism
ssen01230
Biosynthesis of amino acids
ssen01240
Biosynthesis of cofactors
ssen04981
Folate transport and metabolism
Module
ssen_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122785175 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122785175 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122785175 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122785175 (shmt1)
Enzymes [BR:
ssen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
122785175 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
122785175
NCBI-ProteinID:
XP_043906781
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Position
LG19:complement(16175870..16183141)
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AA seq
482 aa
AA seq
DB search
MSLTNGAGVSKETWESHNKMMLEPLSINDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSEKWGVNVQPYSGS
PANFAVYTAMVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENAKLFHPRLIIAGTSCYSRNLDYARMRQIANENSAYLMADMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQQQVLDNCKVLSSALIDHGYKIVTGGSDTHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVQDDFRKVA
EFIHRAIQLTLELQSSLEPKATLKEFVQALSKDEKFQQRVAEIRAEVEAFSGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgacaaacggcgccggtgtgagcaaagaaacgtgggagtcgcacaacaaaatg
atgctggagcccctgtccatcaacgactccgaggttttctccatcataaaaaaagagaag
cacagacagacgtacggtctggagctcattgcgtctgagaactttgccagcagagctgtt
cttgaggccctgggttcttgtatgaacaacaagtactctgaggggtatcctggacagagg
tattatggcggcacagagcatgtggatgagctggagaggctttgtcagaagagggcgctg
gaggcctatggtctggactcagagaaatggggcgtgaacgtgcagccatactcaggttcg
cctgctaactttgcggtgtacacggccatggtggagccccacggcagaatcatgggactg
gaccttcctgatggaggtcacctgacacacggcttcatgacagagaagaagaagatctca
gcaacgtccatcttctttgagtcaatgccatacaaggtgaatccagaaactggctacatt
gactatgacagacttcaagaaaatgcaaagctgttccatcccagactcatcattgcggga
acaagctgctactctcgtaaccttgactacgctcgcatgaggcagatcgctaacgagaac
agtgcctatctgatggcagacatggctcacatcagtggcttggtggcggccggtgtggtg
ccctctccctttgagcactgtgacattgtttccaccacgacgcacaagacgttgcgcggc
tgccgcgctggacttatcttctacaggaaaggtgtgcggagcgtcgatgctaaaggcaaa
gagactctgtacaacttggagtctttgattaatcaggctgtgtttcctgggctgcaggga
ggaccacacaaccacgctattgcaggtgtagctgtcgctctcaaacaagccatgacccca
gagtttaaggcctaccagcagcaggttcttgataactgcaaagttctgtccagtgccctg
attgaccacggctacaagatcgtcactggcggttctgacacccatctgatcctgctggac
ctgcgcagcaaaggaactgatggaggacgagcggagaaggttctggaagcctgtgccatc
gcctgtaataagaacacctgtccaggggataaaagtgctttacgccccagtggtctaagg
tttggctctccagctctgacctccagaggcctggtgcaggatgacttcagaaaagtggct
gagttcattcacagagctattcagttgaccttggagctgcaaagcagcctggaacccaag
gccactctgaaggagtttgttcaggctctgtccaaggacgagaagttccagcaacgggtg
gcggagatccgggctgaggtggaggctttttctggtcagttcccaatgcctggccttcct
gagctgtag
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