Solea senegalensis (Senegalese sole): 122785179
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Entry
122785179 CDS
T07721
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122785179 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122785179 (hdac5)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122785179 (hdac5)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122785179 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
122785179
NCBI-ProteinID:
XP_043906786
LinkDB
All DBs
Position
LG19:complement(19470786..19523312)
Genome browser
AA seq
1142 aa
AA seq
DB search
MLLRPTVSGLCAMLQTIYETESCFSSTSSDSHPQPLELLSGNRGSSTAMPTTVVEVKSSL
PSGMQSPVGAASEHRGGGGGGEGGGGPGEGPGGGGGGGPVDLRTEPRVVSLSGGTAAVDT
VLREQQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQ
QELEQKRKLEQQRHEEQEKQRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLSKKEPG
PGGLNHSFSPKGWGAQHSSLEQSSPPQSNTPGTPPSYKLPPLLGNYESKDDFPLRKTVSE
PNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSLCNSAPGSGPSSPNSS
NTAIANGNTGSVPNIQTELRSLHQTLGADGTLSPLSLYTSPSLPNISLGLPANTHITATQ
KLSSQQEAERQAIQSLRGGGALTGKFLSTSSLPAGVGHDVESSPTSSHSAHSSLLQHVLL
LEQARQQTAMLAVPMYNQSPLVTAERGVSGGMRTVNKLPRHRPLARTQSAPLPQSPQALQ
QLVVQQQHQHFLEKHYKMLSKGAELPRPPPTHPEETEEELTETNDMQEDDGGVGPHRLQK
DGSDDSTHSSERLGVYLKGEEEHGGMQVKGESTESELDEEEEDEDVIHLGEVDEEERGTY
SQALQHLGVFQSSMSHRPLGRAQSSPAATVNPIKHLFTTGLVYDSLMLKHQCVCGNAHIH
PEHAGRVQSIWSRLQETGLLNRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDH
KKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFRVAAGELKNGF
AVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIMDWDIHHGNGTQQAFYSD
PSVLYISLHRYDNGNFFPGSGAPEEVGSGAGVGFNVNIAWTGGVEPPMGDVEYLTAFRSV
VMPIAQQFSPDVVLVSAGFDAVEGHQSPLGGYNVSAKCFGQLTQLLMGLAGGRVVMALEG
GHELTAICDASEACVSALLGDMCDSTYQWPQEKPCPKACASLEKVIEIQSKHWPCLQSLS
QTSGHSLLDGPLSAQGQSEKDEAETVSAMASLSVDVEQPGSVPGSSETSRSAEEPMEEEP
VL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcgtcccacagtgtcaggattgtgcgccatgttgcagaccatctatgagact
gaatcctgcttttcctccacaagctcagacagccacccgcagcctctggagctcctgagt
ggtaacaggggctccagcactgccatgcccaccaccgtggtggaggtgaagagcagcctc
ccgtcgggcatgcagagcccagtaggagcagcaagcgaacacagaggaggtggaggagga
ggagaaggtggtgggggtccaggggaaggcccaggaggaggaggtggaggaggtccagtg
gacctgcggacagagcccagggtggtgtctctgtccgggggtacagcggcggtggacacc
gtcctcagagagcagcagctccagcaggaactggttctgctcaagcagcagcaggagctg
cagaaacagctgctgtttgccgagttccagaagaaacacgaagtgctgacgaggcagcac
gaggtccagctgcaggaacacctcaagcaacaacaggagctgctggcagcaaagaggcag
caggagctggaacagaagagaaaactggagcagcagcgacacgaggagcaggagaagcag
aggctggagcagcagctgctgctgctgaggaacaaggagaaaggcaaagagagtgccatt
gccagtactgaggtgaagctgaagctccaggagtttcttctcagtaagaaagagcctggt
cctggtggactcaaccattccttctccccaaagggctggggagcccagcactcctccctg
gagcagagctctcctccgcagagtaacaccccaggaactcctccctcgtataaactgcct
ccgctgctggggaactacgagagcaaagatgatttcccactccgcaagacggtctcggag
ccgaacctgaaggtgcgttcgcggttgaagcagaaggtggcggagaggcggagctcccca
cttctccgcaggaaggacggcacagtcatcagcacctttaagaagagagccatagagata
tcagtgtcctctctctgtaatagcgctccaggttcaggtcccagcagtcccaacagttcc
aacacagctatcgccaacggcaacacgggatcagtccccaacattcagactgagctgaga
tctctccatcaaacactgggggctgatgggacattgagtccactgagtctctatacctcg
ccttccctgccaaacatttccctggggctcccagcgaacacacacatcacggccacccag
aagctgtcttcccagcaagaggccgaacgtcaagccatccaatcgctgcgaggcggtggc
gcactcacggggaagtttctgtccacatcctctctacctgcaggggtgggacacgacgtg
gagtcatcgccgaccagctctcactctgctcattcctcattactgcaacatgttctacta
ctggagcaggccaggcaacagactgccatgctcgctgtccccatgtacaaccagtcgccg
ttggttacggcagagagaggcgtgtccggtggcatgcgcacggtcaacaagttgcctcgc
catcgaccgctggcccgtacccagagtgcacctctgcctcagtcgccgcaggccctgcag
cagctggtggttcagcagcagcatcagcacttcctggagaaacactacaagatgttgtcg
aagggggctgaacttcccaggccgccacccacccacccagaggagacagaggaggagcta
acagagaccaatgacatgcaggaggatgacggaggggtggggcctcacaggcttcagaag
gacgggtccgacgacagcacgcactcctccgagcgactcggcgtgtacttaaagggagag
gaggagcacgggggcatgcaggtgaaaggggagagcacggagagcgagctggacgaggag
gaagaggacgaagacgtcatccacctgggggaggtcgatgaagaggagagagggacctac
tcacaggccttgcagcacttgggtgtatttcagtcctcgatgtcacacagacctctggga
agagcacagtcctcccctgcagccactgtcaatcccatcaaacacctttttaccactggg
cttgtgtacgacagtctgatgttgaagcatcagtgtgtgtgcggcaatgctcacattcac
ccagagcatgctgggagagtgcagagcatctggtccagactgcaggagacgggcctgctg
aaccgctgcgagaggattcgtgggcgtaaagcgtctctggacgagatccagtccgttcat
tcagaattccacactctgctgtatggaaccagcccgctcaatcgacacaagctggaccac
aagaagttgctgggtccaatcagccagaagatgtacgctgttcttccctgtggaggaatc
ggggtggacagtgacaccgtgtggaacgagatgcactcgtcggcggcggtccgcatggcg
gtcggctcggtcatcgagctggccttcagagtggcggcgggggagctgaagaatggcttc
gctgtggtgcgtccaccgggtcaccacgctgaggaatccaccgccatgggcttttgtttc
tttaactccgtcgccatcactgccaaactactgcagcagaaactgggggtgggcaagatc
ctcatcatggattgggacattcaccatggcaacggcacccagcaggccttctacagtgac
cccagcgtcctctacatctccctccatcggtacgataacggaaacttctttcctggcagt
ggagctcctgaggaggttggatcaggtgctggtgttggttttaatgtaaacatagcatgg
actggaggagtggagccccctatgggtgatgtggagtacttgactgccttcaggagcgtg
gtgatgcccatcgctcagcagttcagcccagatgtggttctggtgtctgcaggctttgat
gcagtcgagggtcatcagtctcctctaggaggttacaatgtttccgccaagtgttttggt
cagctgacgcagctgctgatgggtcttgccggtgggcgggtcgtcatggcgctggagggc
ggtcatgaactcaccgccatctgtgacgcgtcagaggcctgtgtgtctgcgcttcttgga
gacatgtgtgactcaacttatcagtggcctcaggagaaaccatgtccaaaagcctgtgcc
tctctggagaaagtaatagagatccagagcaaacactggccttgtcttcagtctttgtct
cagacgagtggccactcgctcctggacggccccctcagcgctcagggccagtcggagaag
gacgaggcagagacggtcagcgccatggcctccctgagtgtggatgtagagcagccgggg
tctgtacctggcagctcagaaaccagcaggtccgcagaggagcccatggaagaagagcct
gtcttgtag
DBGET
integrated database retrieval system
