Solea senegalensis (Senegalese sole): 122785257
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Entry
122785257 CDS
T07721
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
122785257
NCBI-ProteinID:
XP_043906921
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Position
LG2:complement(19874106..19888249)
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AA seq
740 aa
AA seq
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MPPLILTLLELAALTYVSGGAFYGHKQHPQQYQPVQHHQQHMGMGKEGFPQQQFIGKEIP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NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctcatcctgacactgctagaacttgcagcacttacctatgtgagtggtggg
gccttctacggacacaagcaacaccctcagcaataccaaccagtgcaacaccaccaacaa
cacatgggcatggggaaagagggctttccccagcaacagttcattggcaaagagattcct
tatatgcagtatccacattacaggaaggagctaccccagatgcccatgttcaagggcaaa
gaaaatgctcgtaagggaggcagatataatggtggtcaagacaaaggtcagacaatccct
agtggagctgagggaattcctcagggacagccaggtccagccggaccacctggaccagag
ggaccccaaggacctcctggacctccaggaaatgaacaaccaggacctgctgggcaaccc
ggacccgctggaccaccaggagtgcctggaattggaaaaccaggtttaccaggacttcca
ggcaagcctgggggaaacagtgagcctgggccacaaggagaaatgggtcctaggggtgag
gaagggccacctggacagccagggcctcagggtcctccaggaccccctgggctaccagga
ataggtaaaccaggggtacagggattacctggtcagccagggatgaaaggagagccaggt
cacaaaggattgccaggactacccggactacctggacccaaaggtgataaaggaatgggc
ctgccaggccaaccaggtcacaaaggtctcccaggacccctgggacctgctggcccaaga
ggactgcctggttctgggaagcctggtctgaatggggcaccaggcatacaaggcccacca
ggagagaaaggacatcctggagagcaaggaccagctgggctacctggtgaaggagggcgg
cctggcccaccaggactgccaggtcaaggaaaaccaggtcaaaatggcctgccaggacag
ccaggtataccaggaccaaaaggacatccaggaccaccaggtttgccaggaaagccagga
ctgcctggatttggtaaaccagggctcccaggccccaagggtgataaaggtatgggtgga
cctcttgggtcaccaggagcaaagggagataaaggacatggaggactccctggcatgcct
ggaccccctggtccaaatggcccaccaggtccttcaggccccatgggacccccaggagga
ttaggtgcccctggtcctaaaggtgactgtggagaaggaggacctaaagggcttgatgga
gcccagggagaacctggttttcctgggatatctggtaaagatggtcttccaggagaaaga
ggggaacctggaccaagaggtcccccagggctgaacggtgccaaaggagatgatggccat
aaaggcctacctggtacccctggtcctgcaggacttccagggccaaaaggacaaggtggg
ttacctggtgaagtgggacctcaggggcccaaaggaatcccaggaatggacggtgcagct
gggccaattggtctccttggtcttccaggaccaaaaggagatagtggtcaacctggttta
ccaggaattgcaggtgaggggagaataggtcttcctggtcccataggaccccaaggaaca
gagggcccatcaggccctcctgggttaccaggttcggctggccctcctggaccaccgggt
ccacctggagtacctggcctgtctcctgacatggctggagtactctctcagatgggtcct
ggactagatggtgttaaggcaggtagttatggtaaaaagggcaagtatgaaggcaatggg
gcagaagtaatgggtgtcagtgggttggaaatgccagcatttacagccatagcaacaact
cccttcccacctgtgggtactccagttgtctttgacaagaccttatacaatggtcgccaa
aactacaaccctcaaacagggattttcacctgtgacatgccaggcatttattactttgcc
taccatgtccattgcaaaggagctaatgtgtgggtggctttgatgaggaatgatgaacca
gtcatgtatacatatgatgaatacaaaaagggtgtcctagaccaagcatcagggagtgca
gtattacctctccaacctggagacactgtttatattcagctaccctcagatcaggcctca
ggactttatgctgggcagtatgtgcactcctccttttctgggtatttgttatatccgatg
taa
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