Solea senegalensis (Senegalese sole): 122785299
Help
Entry
122785299 CDS
T07721
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssen00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ssen01100
Metabolic pathways
Module
ssen_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122785299
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
122785299
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssen01003
]
122785299
Enzymes [BR:
ssen01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
122785299
Glycosyltransferases [BR:
ssen01003
]
O-Glycan biosynthesis
Glycosaminoglycan
122785299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
Xylo_C
Motif
Other DBs
NCBI-GeneID:
122785299
NCBI-ProteinID:
XP_043906967
LinkDB
All DBs
Position
LG19:complement(19964217..19975025)
Genome browser
AA seq
649 aa
AA seq
DB search
MNVHPCARRLARRSGSALLLAAVAVLLLQTLVVWNFSSLDSGATSREKREERAGELNKAA
AAAAAAGAGGGQQQQQRRWRRRSDPAAGLQLQAHRQKDKLRLDSNNNENSVPKDFDSVDS
NSNLGARSQRQQVSTGNAKHQPDKVQSDDVLKSSPVQTRGVAHNRSHAHLHKPHPQAPTP
MKMAAGLVPKKERQQCEVSGKEAISALSRAKSRECRQQIVEVYCKHKESVLMPEKVPRYC
PTEGKANVNAPWDEGPLDTSQLVPVRIAFVLVVHGRASRQFMRLFKAIYHTSHYYYIHVD
KRSNFLQREVLSLAGQYPNVRVTPWRMATIWGGASLLTMYLRSMEDLLKMADWSWDFFIN
LSAADYPIRTNDQLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDR
KIPEGIAVDGGSDWFLLSRPFVDYVVNSRDELVTGMKRFYSYTLLPAESFFHTVLENSAL
CGTMVDNNLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKPADLPRFQQVSRPTFFARKFE
ASVSQEIINQLDSYLFGAYASGTPGLQAYWENIYEQDTDGPASLSDSTLSHYHAFARMGL
SCAARSLQGRPSDDSCRYEHFVLLSPCDVITTMVDMSDYQSQQITGVCL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcacccgtgtgcccgcaggctggctcgccgctccggctccgcgctgctgctc
gccgccgtggccgtgctgctgctccagacgctggtggtgtggaacttcagcagcctggac
tctggagccacgagccgggagaagagagaggagcgagccggggagctgaacaaagccgcc
gccgccgccgccgccgccggtgctggtggcgggcagcagcagcagcagcggcggtggagg
aggaggagtgacccggctgctgggctccagctgcaggcgcatcgtcagaaagacaaactg
cgtctggacagcaacaacaacgagaactctgtccccaaagactttgactctgtggacagc
aacagtaacctcggcgcgcgctcccagcgccagcaagtgtcgaccggaaacgccaaacat
cagccggacaaagtgcagagtgacgacgtcctcaagtcgtctcccgtccaaaccagaggg
gtcgcccacaaccgcagtcacgcccacctccacaaaccacacccccaggcaccgacaccg
atgaaaatggcggccggactagtgccgaagaaagagcggcaacagtgtgaggtcagcggg
aaagaggccatttctgctctgtcccgagccaagagccgcgagtgtcggcagcagatcgtg
gaagtttactgcaaacacaaggagagcgtgctgatgcccgagaaggtgcctcgctactgc
cccacagagggtaaggctaacgtgaatgcgccgtgggacgagggacccttggacacttcc
cagcttgtgccggtgcggatcgcctttgtgctggtcgtccacggccgagcatcgcgtcag
ttcatgcgtctcttcaaagcaatctaccacacgtcacactactactacatccatgttgac
aagcggtccaacttcctccaaagagaggtcctgtctctggccggccagtatccaaatgtg
cgggtcacaccttggcgaatggccaccatctggggcggggccagtctgttgaccatgtat
ctgcgcagcatggaggacctgctcaaaatggctgactggtcctgggacttcttcatcaac
ctgagtgctgcagattaccccatcaggaccaacgatcagctggtggctttcctgtcaaag
taccgcaacatgaacttcatcaaatctcacggcagagacaacgcacgtttcatccgtaaa
cagggtctggaccgtctcttctatgagtgcgacacacacatgtggcgtctcggcgatcgc
aagatcccagagggcatcgcggtggacggaggctctgattggttcctgctcagccggccc
tttgtggattacgtggtcaactctagagacgagctggtcaccggcatgaagcgcttctac
tcctacacactgctgcccgcagagtcctttttccacactgtgctggagaacagcgccctc
tgtgggaccatggtggacaacaacctgcggctcactaactggaaccgcaaactgggctgc
aaatgccagtacaagcacatcgtggactggtgcggctgctcgcccaacgacttcaaacct
gctgatctgccgcgattccagcaagtgtccagacccaccttctttgccaggaagtttgag
gccagcgtgagtcaggagatcatcaaccagctggactcgtacctgtttggtgcgtacgcg
tcgggaacgccgggcctacaagcctactgggaaaacatctacgagcaggacacggacgga
cccgccagcctgtcggactccacgctcagtcactaccacgccttcgcccgcatgggatta
tcgtgcgctgcgcgctcgctgcagggccgtcccagcgacgacagctgcaggtacgaacac
tttgttctcttaagtccctgtgacgtgataacaacgatggtcgacatgtcagattatcaa
tcacagcagattactggcgtatgtttgtga
DBGET
integrated database retrieval system
