Solea senegalensis (Senegalese sole): 122785538
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Entry
122785538 CDS
T07721
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03440
Homologous recombination
ssen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122785538 (top3a)
03460 Fanconi anemia pathway
122785538 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssen03032
]
122785538 (top3a)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122785538 (top3a)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122785538 (top3a)
DNA replication proteins [BR:
ssen03032
]
Eukaryotic type
DNA Topoisomerases
122785538 (top3a)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122785538 (top3a)
FA (Fanconi anemia) pathway
122785538 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
HypA
Lar_restr_allev
HisG
Motif
Other DBs
NCBI-GeneID:
122785538
NCBI-ProteinID:
XP_043907314
LinkDB
All DBs
Position
LG19:16197729..16209824
Genome browser
AA seq
1037 aa
AA seq
DB search
MQIVHSLGRSLLRPGLQLLGVQRRCLCAAQSSGSLTLADTPQQADMIRSRAQIRRVLCVA
EKNDAAKGISEIMSSGRAMRREGLSKFNKLYEYDYHLFGQDVKVTMTSVSGHLLALEFKA
PFQKWHSCNPVLLFDAEVEKYCPDNMVQIKRTLEKEARQCQALVIWTDCDREGENIGFEV
IDVCKAVKPNLQVFRAKFSEITPNSIRRACETLTEPDVNISDAVDVRQELDLRIGASFTR
FQTLRLQKIFPEALANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEEN
VEFSWKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRKL
RISAKETMKIAEKLYTQGFISYPRTETNIFPANLALGPLVEQQSHSPVWGTFAQRVLDQP
GGPNPRQGKKSDQAHPPIHPTKYSSTLQGNEGRVYEFIVRHFLACVSQDALGQETVVDID
IAQEKFSTSGLMIIARNYLDVYPYDRWSTKVIPVYEHGSQFQPSAIEMVDGQTSPPQLLT
EADLISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEM
SKPNLRSELEADLKLVSEGRKEKRSVLLHHIQKYKAVFIESAKKAKKLDEALSTYLGAAH
EITEEEQLDMEIPLPVRKCPHCGRDMVLKKKREVNSKYLSCSGFPACKTAVWFPDTVLEV
SRDDSICPTCRPHPVHMLNFKFRRGSLPPMMSLEFVGCIGGCDETLREVLDLKYLRAAGG
GGGRGMGGGGGRGDSRPPAPRPRRQEQPRPRSNPQPSLPPVPSWNPQPRSPPGGGQRSVD
PNSDAIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPNQPGAPQSQGLPR
PLPAPKTVQTPRPSLGFSNTFGGGQGPEGGDGGQTMCNCNETAVTRTVQKDGPNKGRIFH
TCGKPREQQCGFFQWADENVPPPGGFGGGFNGGRDEGRRGRKTTGGSAPNKPPAAKKART
CGICHMPGHTRVTCPQR
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagtgcattccctcggaagatccttgcttcgaccgggactacagcttctcggg
gtccagcggaggtgtctctgtgcagcacagagcagcggctctctgacactcgctgacaca
ccacagcaggcagacatgatccggagccgggctcagatcaggcgggtgctctgcgtagcc
gagaagaacgatgcagcgaaaggcatctcagagatcatgtccagcggcagagccatgagg
agggaaggactatcaaagtttaacaaactctatgagtatgactatcacctctttggtcag
gatgtcaaagtaacaatgacatcggtttcaggtcatttactagccctggaatttaaagca
cctttccaaaaatggcacagttgcaatcctgtactgctatttgatgctgaggtggagaag
tattgtccggataacatggtacaaatcaagcggacactagagaaagaggcaaggcagtgc
caggctttagtcatctggactgattgtgacagagaaggagagaacattggttttgaagtc
atagatgtctgcaaagcagtaaaacccaatttacaagttttccgggctaagttttctgaa
attacccccaattccattcggagagcttgtgaaactctgactgagccagatgttaacatc
agtgatgctgttgatgtacgtcaggagcttgacctgcggataggtgcatccttcactcga
ttccagacacttcgcctgcagaagatctttccagaggctctggccaatcagctgatctcg
tatggcagctgtcagtttcctacgctgggttttgtggtggagcgtttcaaagccatccag
gccttcatacctgagactttctataagataaaggtgctgcatgaggtcgaagaggaaaat
gtagagtttagctggaaaagaaaccgtctcttcaaccacacggcctgcctggtgctctac
cagatctgcatggaggatcccatagcaacagtcacctcagtaaccagcaaacccaagagc
aagtggagaccgctgcctttggacactgtggaaatggagaaactggcatctcggaagcta
agaataagtgccaaagagactatgaaaattgcagaaaaactctatactcaagggttcatc
agctacccccgcactgagacaaacattttccctgcaaacttggctctcggccctctggtg
gagcagcagagtcacagcccagtctgggggacgtttgcacagcgggtgctcgatcagcct
gggggccccaacccacgacagggcaagaagtctgaccaagcccatccccccatacacccc
acaaagtacagcagcacactgcagggaaatgaaggacgtgtttatgagttcattgttagg
cacttcctggcctgcgtatcccaggatgctttggggcaggagacggtggtggacatagac
attgctcaggagaagttctccacctcaggacttatgatcattgcaaggaactacctggat
gtttacccatatgacagatggagtaccaaggtgattccggtgtatgaacacggctcccag
tttcagccttctgccatcgagatggtggatggacagacgagtcctcctcagctgctcact
gaagctgatctcatatcactgatggagaagcacggcattggcacagatgcgactcacgca
gagcacattgagacgatcaagagtcgcatgtatgtcggcttgacggcggaccagagattt
ctccctggagagcttggaatggggctggtggagggttacaactccatgggttatgagatg
tccaaaccaaacctacgttctgaattggaggcagacctgaagctggtgtctgagggcagg
aaggaaaaacggagcgtgttgcttcaccacatccagaaatacaaagctgtcttcatcgag
tctgccaagaaggcaaagaagttagacgaagccctgtcaacatatttgggtgcagctcat
gagatcactgaagaagagcagctggacatggagatcccattgccggtcaggaaatgtcca
cactgtggtcgggacatggtgctgaagaagaagagggaggtaaacagtaagtacctgtcc
tgctcgggtttcccagcctgtaagacggcagtgtggttccctgacacagtgctggaggtc
agcagggatgacagcatttgtcccacctgtcggccacatcctgttcacatgttgaacttt
aagttccgcaggggcagcctccctccaatgatgtctttagaatttgttggctgcattgga
ggttgtgacgagacgctccgagaggtgctggacctgaaatacctcagagcagcaggagga
ggaggggggcgtggaatgggaggaggtggaggaagaggtgactctcgaccaccagcaccg
aggccccgccggcaagagcagcccagaccacgatccaatcctcaaccgtcccttcctcct
gtcccctcctggaatcctcagcctcgatctcccccaggcggaggccagagaagtgttgac
cccaacagtgatgctattgtgtgcaactgtggtcaggacgcacttctcctcactgtgcga
aaagacggtcctaaccaggggcgtcagttctacaagtgcaacgcagggagctgcaacttc
ttcctgtgggcggatcaaccaaatcaacccggagcaccgcagagtcaagggcttccacgt
ccactgcccgcgccaaagactgtgcagactccaaggccttcactggggttcagcaacaca
tttggaggcggtcaggggccagaagggggtgatggaggacagacgatgtgtaactgtaat
gagacagcagtgacacgcacggtgcagaaggatggtccaaacaagggccggatattccac
acctgtgggaaaccgagagaacagcagtgtggcttcttccaatgggctgatgagaatgta
cctccaccaggtggttttggtggaggctttaatggcggcagagacgaagggaggaggggg
agaaagacaacgggagggtccgcccctaacaaacctccagctgctaagaaagcccgtact
tgtggcatctgccacatgcctggacacactcgtgtcacctgtccacagcggtga
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