Solea senegalensis (Senegalese sole): 122785653
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Entry
122785653 CDS
T07721
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04020
Calcium signaling pathway
ssen04080
Neuroactive ligand-receptor interaction
ssen04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122785653
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122785653
04082 Neuroactive ligand signaling
122785653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122785653
Ion channels [BR:
ssen04040
]
Ligand-gated channels
Glutamate (ionotropic)
122785653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122785653
NCBI-ProteinID:
XP_043907483
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All DBs
Position
LG19:16860448..16979453
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AA seq
1707 aa
AA seq
DB search
MSLWLAKHKVLPSHSSTMPVCSCSSPSLPPGHAGSSTYVPSIAQGHESPAQPRHPPPPLS
LHCRTSISSCLSLLLLLLCLLHLPPACHSRREKGGGGGGGGGHYIPIPQPPPHHMALPNI
LRGLSIAVVLVGNSSEMALAGAREKEDFLHMAPNVELLTMNETDPKSIIKSICDLMTEHW
LQGVVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDHSMFFQFGPSIEQQ
ASVILNIMEEYDWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGD
SKIQNQLKKLQSPVILLYCTKEEANTIFEVAHSVGITGYGFTWIVPSLVAGDTVVVPAEF
PTGLLSVSYDEWDYGLEARVRDGVAIITMATSTMMMDRGPHTLLKSECHGAPEKKTPISG
NPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWDRVGKWENGSLSMKYHV
WPRYELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKMGNQTKE
SGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHM
AVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLL
VSAVAVFIFEYFSPVGYNRCLADGREPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTS
KIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQSPNDFSPPFRFGTVPN
GSTERNIRNNYPEMHSYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKL
VTIGSGYIFATTGYGIAIQKESLWKRHVDLAILQLFGDGEMEELESLWLTGICHHEKNEV
MSSQLDVDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGQPGFVFSISRGI
YSCIHGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGVNGSPHSALDFIRR
ESSVYDISEHRRSLAGHSDCKPPYIPEDNMFSDYISEVERTFGNLHMKDSNLYQDHYLHH
HGSTPGLSGPPPNRPLSLGSASSLEGGMFDCDSLGGGVAPIFTTQPCSALTHRNMSKFDL
LSGQTPPSGQGFTGALPDLYGKFSSSTYIPGPSYIPGRGDDDGNIRSDVSDISTHTVTYG
NLEGNAKKRKKYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYHNHRSASPPPLP
SERKRGGGGGGGGNNDDNSYLFREKESVRDFYLDQFRPKEGVPQWEHVDLTEGPRNRDGG
VGALVPVDDFLKSKPKKSDSKGGGSGLAGGEWECRNCRASGGGGSKQMSMHGGGGGYGGG
MSCGSSAGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQMGEGQGGGGGMGAGPQ
SQAQQRRKSGGFGKPLRRQHSYDAFVDLQKEESGGMGSMMGGLGGGMSGAGMGGMLPPPR
SVSLKEKERYMEGTSPFAHIFERHGGSERERERDRDPLFYGGEGRKGPGSPFGLFRGGEG
LHRRSVGERDMRDRDRSLMEGGGGGAFSLSKSLYPDRVNQNPFIPTFGDDQCLMHGAKQY
YMKKQQQQQQVAKNSRSDLRGQMSTTSYLPASATAGVVSNVAPRFPKELSLGGMNHHGSM
LGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttggctggcaaaacacaaggtattaccctcccactcctccaccatgcctgtc
tgcagctgcagcagcccctccctgcctcctggccacgctgggtcctccacctatgtcccc
tccatcgcccaggggcacgagagtccagcacagccccgacatccacctccacctctgtca
cttcactgccgcaccagcatttcttcttgcctatctcttcttctcctgctcctttgcctt
ctccacctgccccccgcctgccactcacggagagagaaaggtgggggaggcggcggcggc
ggtggtcactacatacccatcccgcaacctccgccgcaccacatggccctgcccaacatc
ctgcgaggcctcagcattgctgtcgtcctggtgggcaactctagcgaaatggcactggcc
ggggcccgggagaaagaggactttctccacatggcacccaatgtggagctgctgaccatg
aatgagacggaccctaaaagcatcatcaagagcatatgtgacctcatgactgaacactgg
ctgcagggtgtcgtgtttggggatgacactgaccaggaggcaatcgcccagatcctggac
ttcatttcagcccagacgcacattccaattctaggagtccgtgggggctcctccatgatc
atggctgccaaggatgaccactccatgttctttcagttcggcccctccatcgagcaacag
gcatcggtcatcctgaacatcatggaggaatatgactggtacatcttctccatcgtcacc
acgtactacccaggttaccaggactttgtcaccaagatccgtagcaccattgagaacagt
tttgtgggctgggaactggaggaagttttattacttgacatgtcggtcgatgacggagat
tcaaagatccagaaccagctgaagaagctccagagtcctgttatcctgctgtactgcaca
aaagaggaggccaacaccatctttgaggtcgcccactctgttgggatcactggctacggc
ttcacatggatagtgccctcgctggtcgctggagacactgttgtcgtgcctgccgagttc
cccacaggtctgctctcggtgtcctacgacgagtgggactacggcctggaggcgcgcgtt
cgtgacggtgtggcaataatcactatggcgacctccaccatgatgatggaccgcggacct
cacacgctgctgaagtctgagtgccacggagctcctgaaaagaaaacccccatctcaggc
aaccccaatgaagtgctcaggtatctgatgaatgtgacgttcgagggacgcaatctgtca
ttcagcgaggacggataccagatgcaccccaagctggtcatcattctgctcaacaaggag
agacagtgggacagggtgggcaagtgggagaacggctccctttccatgaagtaccatgtg
tggccgcgctatgagctgtatgggggggcagcaaccagggaggacgaccacctgtccatc
gtgactttggaggaggctccgttcgtcatcgtggaagacgtggatcctcttagcgggacc
tgcatgaggaacaccgttccctgccgcaagcagatcaagatgggtaatcaaactaaggag
tcgggcatctacatcaagcgctgttgtaagggtttctgtatcgacatcttgaagaagatc
gccaagtctgtgaagttcacctacgacctttacctggtgaccaatggcaaacatggcaag
aagatcaatggaacgtggaatggcatggtcggggaggtggtgttaaaaaacgctcacatg
gctgtcggctccttgaccatcaatgaggaaaggtcagaagtcatcgacttctccgtcccc
ttcatcgagacgggcatcagcgtcatggtctcccggagcaacggcactgtgtctccttcg
gccttcttagagcccttcagtgcggatgtgtgggtgatgatgtttgtgatgctcttgctg
gtgtcagcagtggctgtgtttatattcgagtacttcagccctgtgggctacaaccgctgt
ctggctgacggcagagagcctcatggtccgtccttcaccatcggtaaggccatctggctg
ctgtggggtctggtcttcaacaactctgtgccggtgcagaaccccaaaggcaccaccagt
aagatcatggtgtcagtgtgggccttctttgctgtcatcttcctggcctcgtacactgcc
aatctggccgccttcatgatccaggaggaatacgtggaccaggtatcgggtctctcggac
aaaaagttccagagtcccaatgacttttcgcctccatttcggtttggcaccgtcccaaac
gggagtacagagaggaacattaggaacaactatccagaaatgcactcctacatgaccaag
ttccatcagagaaacgtcaatgaggccctgcagagtctcaaggctggcaaactagacgct
ttcatttatgacgccgccgtactgaactacatggctggcagggacgagggctgcaagctg
gtgaccattggcagcggctacatctttgccaccacgggatacggcatcgccattcagaag
gagtcgctctggaagagacacgtggacctggccatcctgcagctctttggagacggtgag
atggaggagctggagtccctgtggctgacggggatctgccaccatgagaagaacgaggtg
atgtccagtcagctggacgtggacaacatggcgggcgtcttctacatgctcggcgccgcc
atggccctgtcactcatcaccttcatttgtgagcactggttctactggcagcttcgcttc
tgcttcatgggcgtctgctccggccagcccggcttcgtcttctccattagcaggggcatc
tacagctgtatccacggcgtgcagatagaggagaaaagcagttcagcactgaactccccg
tccgccaccatgaacaacacccactccaacatcatgcgcctgctgcgcaccgccaagaac
atggcctcgctctcaggggtgaacggctcgccgcacagtgctctggacttcatccgtcgc
gaatcctcggtttatgacatctctgaacaccggcgtagcttggcgggccactcggactgc
aagccgccgtatataccggaagacaacatgttcagcgattacatcagcgaggtggagagg
acgtttggcaacctccacatgaaggacagtaatctgtaccaggaccattacctgcatcac
catggctcgactccagggctcagcggacctcctcccaacaggcccctcagtttgggcagc
gccagttcactggagggcggcatgttcgattgtgacagcctcggtggtggggtggcccct
atttttaccacgcagccctgctctgcactgacccacaggaacatgagcaagtttgacttg
ctgtctgggcagactccgccctcaggccagggcttcacaggagccctgccagacctgtat
gggaagttctccagttccacctacatccctggacccagctatattccaggcagaggagat
gatgatgggaatatacgctcagatgtctcagacatttccacgcacactgttacatatgga
aacctggagggcaatgccaagaagcggaaaaagtaccgtgatagcttgaaaaagaggccg
gcctctgccaagtccagacgggagctggacgagattgagctcggctacaggaggaaaccg
taccacatcagccatcaccactaccacaaccaccgctctgcctctccaccacctttgccc
tctgaacgcaagagaggaggaggaggaggaggaggtggaaacaatgatgacaattcatat
ctcttcagagaaaaggagagtgttagggatttttatttggaccagtttcggcccaaggag
ggcgtccctcagtgggagcatgtggacctgaccgagggccctaggaatagagatgggggt
gtgggggctctggtgccagtggatgactttcttaagagtaaacccaaaaagtctgactca
aagggtggaggatctgggttggcagggggagagtgggaatgcaggaactgtcgggctagc
gggggaggagggagcaagcagatgtccatgcatggaggagggggtgggtatggtggtggt
atgagctgcgggtcttcggcaggcggaggaaacagccggcccagctctgcaacctgcatg
cgctgcgagggctgtaaaaagacagggaacctctatgatatcagcgaggacaacaaccac
ctcttggaacagatgggtgaaggccaaggtgggggaggaggtatgggcgcaggccctcaa
tctcaggcccagcagaggaggaagagtggaggattcggcaaaccactacggcggcagcac
tcgtacgacgcatttgttgaccttcagaaagaggagtcaggtgggatgggaagtatgatg
gggggtctgggtggaggcatgagcggcgccggcatgggagggatgctgcccccacccagg
agcgttagcttgaaggagaaagaacgctacatggagggcaccagccccttcgcacacata
tttgagcgtcatggtggatcggagagagaacgggaaagggacagggatccgttgttttat
ggaggtgagggccggaaaggacctggctcaccattcggcctgtttagaggtggagagggc
ctccaccgccgctccgtgggcgagagggacatgagagacagggataggtctttgatggaa
ggaggaggtggaggagcattttctttatccaaatctctttaccctgatcgggtaaaccaa
aacccctttatacccacctttggtgacgaccagtgtctgatgcacggagccaaacaatat
tacatgaaaaagcaacagcagcagcaacaagttgccaaaaacagccgaagtgacttgagg
ggccagatgagcacgacgtcatatctgccagcatctgccacggccggggtggtgtccaat
gtagcaccccggttcccaaaagagctcagccttggtggaatgaaccaccacggctccatg
ctgggggtcggacccccgcgtcccttcaatggaagcaatggccatgtgtacgagaaactc
tccagtattgagtctgatgtgtga
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integrated database retrieval system
