Solea senegalensis (Senegalese sole): 122785780
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Entry
122785780 CDS
T07721
Name
(RefSeq) transcription factor Sox-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122785780
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122785780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122785780
NCBI-ProteinID:
XP_043907655
LinkDB
All DBs
Position
LG19:11790949..11793973
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AA seq
469 aa
AA seq
DB search
MLKMTEEHDKCGGDQPCSPSGTNSSMSQDESDSDAPSSPTGSDGQGSLLTGLGKKLDCED
DDRFPACIREAVSQVLKGYDWSLVPMPVRGSGSMKNKPHVKRPMNAFMVWAQAARRKLAD
QYPHLHNAELSKTLGKLWRLLSESEKRPFVDEAERLRVQHKKDHPDYKYQPRRRKNVKPG
QSDSDSGAELAHHMYKAEPGMGGLAGMTDGHHHPEHAGQPHGPPTPPTTPKTDLHHGVKQ
DLKHEGRRLVDSSRQNIDFSNVDISELSTDVISNMETFDVHEFDQYLPLNGHTSGSSALP
SDHSHGQAPAPGSSYTSSYGHTGANGSVWSRKGPMSSSSTSSAGEVAQHRLHIKTEQLSP
SHYSEHSHGSPSHSDYGSFSSQACVTSATSAAAAAASFSSSQCDYTDLQSSNYYNPYSGY
PSSLYQYPYFHSSRRPYTSPILNSLSMAPAHSPTASSWDQPVYTTLSRP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatgacagaggagcatgacaagtgtggcggcgaccagccgtgcagtccatcc
ggcacaaacagctccatgtctcaggacgagtccgactcagacgctccgtcctcgccgacg
ggctccgacggccaaggatccttgctcaccggtctgggcaagaaactggactgcgaggat
gacgaccggttcccggcttgcatacgggaagccgtttctcaggtgctcaagggatacgac
tggtccttggtgcccatgcccgtgcgagggagcggatccatgaagaacaaaccccacgtc
aaaagacccatgaatgcgttcatggtttgggcgcaggcggcacgcagaaagctggcggat
caatatccgcacctgcacaacgccgaactgagcaagacgctggggaaactgtggcgcttg
ctctcagagagtgaaaagaggccgtttgtagatgaggcagaaaggctccgcgttcagcac
aagaaagatcacccggactacaagtaccagcctcggcgacggaagaatgtgaagccaggc
cagagtgactcagattcgggagcagaactggcacatcacatgtataaagctgaaccaggg
atgggaggactggcagggatgacagatggacaccaccaccctgaacatgcaggtcagccc
catggtcccccaacaccacccaccactcccaaaacagatctgcaccacggtgtgaaacag
gatctgaagcatgaaggccgtcgtcttgttgacagcagcaggcaaaacatcgacttcagc
aacgtggacatctccgagcttagcactgatgtcatcagcaacatggagacctttgatgtg
catgagttcgaccagtacctcccgctcaacggccacacctcaggctcctccgccctgccc
tcagaccacagccacgggcaggctccggcgcccggcagctcttacacttcctcatacggc
cacacaggtgccaacggatcagtgtggagtcgcaaaggccccatgtcctcctcctccact
tcctctgccggcgaggtggcccaacatcgactccatattaaaacggagcaactgagcccc
agccactacagcgagcactcccatgggtcgccctcacactccgattatggctccttcagt
agccaagcctgcgtcacctcggccacatcggctgctgcagccgcggcctctttctccagc
tcccagtgtgactatactgacctccagagctccaactattacaacccttactctggctac
ccttctagcctctaccagtatccttacttccactcatccaggcggccctacaccagcccg
atcctcaacagtctgtccatggctcctgcccacagtcccactgcctccagctgggaccag
cccgtctacaccacactgtctcgaccttag
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