Solea senegalensis (Senegalese sole): 122785788
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Entry
122785788 CDS
T07721
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
ssen03040
Spliceosome
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122785788 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
122785788 (alyref)
03015 mRNA surveillance pathway
122785788 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122785788 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122785788 (alyref)
03041 Spliceosome [BR:
ssen03041
]
122785788 (alyref)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122785788 (alyref)
TREX complex
122785788 (alyref)
Spliceosome [BR:
ssen03041
]
Complex C
Other components
EJC/TREX
122785788 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122785788 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122785788
NCBI-ProteinID:
XP_043907675
LinkDB
All DBs
Position
LG19:complement(14754329..14757236)
Genome browser
AA seq
273 aa
AA seq
DB search
MADKLDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGARGGGAGRGGVGGGFGGRGGGSGP
MRSRQNLNRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGTAGGGGGAGVETGGKLLVS
NLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADAHKAMKQYNGIPL
DGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRGRGGGFGGMQRGRGGRGASGSRGRGRG
GRGGSGGGTSKQQLSAEELDAQLDAYNARMDTS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaactggatatgtctctagatgacattattaagcagaacaggcagcaaaga
ggaggaggccgcggtggaagaggtcgaggccgcggaggctccggtggcgcccgaggagga
ggtgctggtcgcggtggagtcggtggcggatttggaggccgaggcggtggatccggcccc
atgaggagccgacagaacctgaaccgcgctagaggcagaccaacgccttacagcaggcct
aaacagcttccagataagtggcagcatgacatgtttgacaacggcttcagcggcttcaat
ggcactgctgggggtggtggaggagctggtgtggaaactggagggaagctccttgtctcc
aatctcgactttggggtctcagatgccgacattcaggaactttttgctgaatttggaacg
ctgaaaaaggctgcagttcattacgaccgatctggaaggagcttgggaactgctgatgta
cactttgaaaggagggcggatgcacataaggccatgaaacagtacaatggcatcccactt
gatgggcgaccgatgaacatacaactcgtcacatcacagatagacacacagagacggcct
atgcaggggctaaatagaggtggtgggggcatgaacagaggtcgtgggggtggatttgga
ggcatgcaaagaggtcgaggaggacgtggtgctagcggttcaagaggaagaggtcgagga
ggacgtggcgggagcggtggtggcaccagcaagcagcagctatcggcagaagaacttgat
gctcagttagatgcctacaatgctagaatggacaccagctaa
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integrated database retrieval system