Solea senegalensis (Senegalese sole): 122785919
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Entry
122785919 CDS
T07721
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03030
DNA replication
ssen03410
Base excision repair
ssen03420
Nucleotide excision repair
ssen03430
Mismatch repair
ssen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122785919 (pold1)
03410 Base excision repair
122785919 (pold1)
03420 Nucleotide excision repair
122785919 (pold1)
03430 Mismatch repair
122785919 (pold1)
03440 Homologous recombination
122785919 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssen03032
]
122785919 (pold1)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122785919 (pold1)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122785919 (pold1)
DNA replication proteins [BR:
ssen03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
122785919 (pold1)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
122785919 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
122785919 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
122785919
NCBI-ProteinID:
XP_043907867
LinkDB
All DBs
Position
LG19:complement(14619571..14628819)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPFKGGASQAKRGKTTSEWEDSPSQFEEELLMLDEAEMEAEDMEGQAGHDVI
PVGDLFSANLNPRWQRPNAPSLKPSSDTLVFQQIDLDYYLDFAVAGMPGQSQGKVPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPAPSGFTSDYLGEFKRELNSAVLKDMRSNKDNISITV
LAVDITHKESMYGYHGKRNLVFLRITMAMPRLIAPAKRLLEQGIKFGPFPIQSYQSFEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRVREEKSMGETNSRYPGKVSLCQYEVDVGWTDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGEMEPFIRTVFT
LQSCAGIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLINRAAALKVN
LFPYLGRVRGIKSVLRDLNIQSKQMGRRENKIINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEKLGLSSEDFIKTPTGDQFVKSSVRKGLL
PEILENLLSARKRAKTELKKETDPFKQQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESRYTIANGYQGDAKVIYGDTDSVMVKLGVATVKEAMDVGK
EAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSQDTHDKMDCKGIETVRRDN
CPLVANLIGTCLQRVLIDRDPQGAVAHAKEIISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYTKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESILLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCK
AVLKTDTAVCDFCKKKESELYQKEIFHLNALEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaagacgcaatggtggcccgtttaagggtggcgcgtctcaggccaaacgg
ggtaaaacaaccagtgaatgggaagacagtccatcacagtttgaagaggaattgctgatg
cttgacgaagctgagatggaggcagaggatatggaaggacaggcaggccacgacgttatt
cctgttggtgacctcttctcagcaaaccttaaccctcgatggcaacgacctaatgcccct
tcactgaagccgtcatctgatacattggtgtttcagcagattgatctggactattattta
gattttgcagtggcgggcatgccgggccaatcacagggaaaagtcccgatcattcgtatg
tttggggtgaccgacagcggcaacagcgtttgttgtcatgtccatggttttgcaccttac
ttctatgttcctgcaccaagtggtttcacgtctgattacttgggtgaatttaaaagagaa
ctgaactctgccgtgctgaaggacatgcgctccaataaagacaacatctccatcacagtg
ttggctgtggacatcactcacaaagagagcatgtatggttaccacggtaaacgcaatctg
gttttcttgcggattaccatggcgatgcctcgtctcattgcccctgctaagaggctactg
gagcaaggcatcaaattcggacctttccccatccagagttatcaatcctttgaggctaat
atagactttgaaatcaggtttatggtagacagtgatgtggtgggatgctgctggattgaa
cttcctaaaggcaaatacagagtgcgagaggagaagagcatgggggaaacaaattcccgg
tacccaggaaaggtgtccttgtgtcagtatgaggtggatgtggggtggacagatttgatc
agtcacccagcagaaggagattggcagaggattgcaccactcagggtcctcagctttgac
atcgagtgtgcaggaaggaaaggaatcttcccagaggcagataaagatcctgtgattcag
attgcttctatggtgcagcgtcagggtgagatggaacccttcattcgcactgtgttcacc
ctccagtcgtgcgccggcatcgtgggctctcagatattatgcttcacgcaggagaaacag
cttctgcagagctgggcagagtttttgaggacggtggacccagacatcatcactggatat
aacattcaaaactttgactttccctacctgatcaacagagcagctgctttaaaggtgaat
ctgtttccatacttgggccgagtgcgagggatcaagtcagtcttgcgagacctgaacatc
cagagcaagcagatgggccgaagagagaacaagatcataaatatggagggccgggttcag
tttgatttgctccaggttctcctccgggactataaactgcgctcatacacgctgaacgct
gtgagtttccacttcctgcaagaacagaaggaagacgtgcagcactccatcatcactgat
ctgcagaatggcaacgaacagactcgcagacgtttagctgtatactgcctgaaggatgcc
tacctcccactgcgtctgctgcagaagctgatgtgtgtgattaactatatggagatggcc
agagtgacgggcgtgcctctcacatacctgctgtcaagaggacagcaaatcaaagtggtc
tcccagttgctgcgacaggccatgaaacaggacctggtcatgcctgttgtaaagacagag
ggtggagaggactacacaggagcaaccgtcattgagccagagaaagggtactacagtgtt
cccattgccaccctggatttctcgtccttgtatccatccatcatgatggcgcacaacctg
tgctacaccaccctactgcagaagggctcagcggagaaattaggtctttcatcagaggac
ttcatcaaaactccgactggggatcagtttgtgaagagttcagtgaggaaaggacttcta
cccgaaatcctggagaacctgctgtctgccagaaagagggctaaaacagagctgaagaag
gaaactgaccctttcaagcagcaggtgctggacggccgtcagctggccctgaaaatcagt
gctaactctgtgtatggcttcaccggggcccaggtgggcaagctgccctgcctggagatc
tcccaaagcgtcacaggttttggaaggcagatgattgaacaaaccaaacagctggtggag
tccaggtacaccattgccaatggttaccaaggtgacgccaaggtcatctatggggacaca
gactctgtcatggtgaagcttggagtagcgacggtaaaggaggccatggatgtcgggaag
gaggccgcagagtgggtgtcgtcacatttcactccacctatcaaactggagtttgagaag
gtgtactatccatacctactgatcaacaagaagcgctacgctggcctgtatttctcctcc
agtcaagacacacacgacaagatggactgtaaaggcatcgagactgtccgccgagacaac
tgccctctggtggctaaccttatcggcacctgtctgcagagagtcctcatagacagggat
ccccagggtgcagtggctcacgccaaagaaataatctcagaccttctttgcaatcgcatt
gacatcagccagctggtcatcacaaaggagctaacgcgcactgcccaggagtacgctggc
aaacaggcacacgtggagctggcagagaggatgaggaagagggatgcaggcagcgccccc
aacctgggagatcgagttccctacgtcatcatcaaggctgcaaagggagcagcagcttac
accaagtcagaggacccgatctatgtgctggagaacaacattcccattgacactcaatat
tatctggaacagcaactgtccaagccactgctgagaatatttgagccgatcctgggagaa
agcaaggcagagagcattctgctcaagggtgatcacacgcgttgcaagactgtactgacc
tcaaaagtcgggggcctcatggcatttgctcagaagagaagcacctgtatcggctgcaaa
gctgtgctgaagaccgacacggcggtgtgtgacttctgtaagaaaaaggagtctgaactg
taccaaaaggagatctttcacttgaacgcactcgaagaacggttttcccgtctgtggact
cagtgtcagcgttgtcagggctcccttcatgaggatgtgctctgtaccagccgggactgt
cccattttctacatgagaaagaaagttcagaaagatttggatgaccagagcaagctggtg
tctcgttttgggtggtga
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integrated database retrieval system
