Solea senegalensis (Senegalese sole): 122786012
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Entry
122786012 CDS
T07721
Symbol
tent4a
Name
(RefSeq) terminal nucleotidyltransferase 4A isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122786012 (tent4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122786012 (tent4a)
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122786012 (tent4a)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122786012 (tent4a)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122786012 (tent4a)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122786012 (tent4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF7752
Motif
Other DBs
NCBI-GeneID:
122786012
NCBI-ProteinID:
XP_043907938
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All DBs
Position
LG20:complement(17068036..17084030)
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AA seq
826 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMHVWETSQGVRTLAQQQQLHNQNHNQCVSYTALDVIKNVA
TAVATGKSICSSGNVTGSRSSSSSHHGIMNGTTTINGTAISTLGVVALSNGNLHNNNSFA
ATSAAAEAGEGKSLPQKPGSVSTSSSSQESRTDSPLERTMGGNVPGNVNNKNVGGANLFY
SLGDSMDINNVNLHHHHRHHHHHHHHHHRHLQEHPAFNVQQICVKRHQLQPAVPVNHTHN
HHPGRRKSENKASTYGMNYLLSNCTNGNYASTWTPWKTRTYNPGVLGLHEEVMDFYNFMS
PRPEEAAMRKEVVNRIEMVIKELWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQ
ELEQALRKHNVAEPFSIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAASFIKDYVK
KYPVLPYLIFVLKQFLLQRDLNEVFTGGISSYSLILMVISFLQLHPRIDARNPTENLGVL
LIEFFELYGRHFNYLKTGIRIKNGGAYIPKEEIMKSMTNGYRPSMLCIEDPLLPGNDVGR
GSYGAMHVKQVFDYAYTVLSHAVSPLARSYPNKECESTLGRIIRLTQEVIDYREWIIKKW
GGRDLARTDNRVSPPKEPVSEQELGSSSIGSEEQQRDSASPHSADSPMSISSPQQHSSAS
SVSSLSGSDNDSDSALPCPVPPPTLSPYPSFPPLGLTLPPGLKPGMGGHHLLIPPGSQAR
VSLPGGLAMHSIPGRQVCIDTGLPPFFHMPSLAHAHAPAPSSPQPPLSPHSSHTHKNTTK
LNVKGFHNPPPVSNPVLANRGHTHTQYHRNTWRRRKRDSLPVSLSR
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggtagcttggattcagcccgaacagaaaggacctgcgaacgccttatgg
atgcacgtctgggagacctctcagggagtacggacgctcgcgcagcagcagcagctccac
aatcagaaccacaaccagtgtgtcagctacactgcgttggatgttataaaaaatgtggcg
accgcggtggcaacgggaaagagcatttgcagcagcggtaacgttacaggcagccggagc
agcagcagcagccatcacggcataatgaacggcactacaactattaacggcactgcgatt
tccacgctaggggtagtagcactgtccaacgggaacctacataataataactcttttgcc
gcgacaagcgccgctgcagaagcaggtgagggcaaaagcctgcctcaaaagcccggatct
gtctccacttcgtcttcttcacaggaatcgcggacggacagtccacttgagaggactatg
ggtggaaatgtgccgggcaacgtgaataataaaaacgtcgggggtgccaatctgttctac
agtttgggcgatagcatggatattaataatgtcaaccttcaccaccaccaccgtcaccac
caccaccatcatcatcaccaccaccgtcacctacaggagcacccggctttcaatgtacag
cagatctgcgtgaagcgtcaccagctccagcctgctgtacctgtaaatcacacacacaat
caccacccgggccgcaggaaaagtgagaacaaggcgagcacttatggaatgaactacttg
ctctcgaactgcactaatggtaattatgccagcacttggacaccgtggaagactcggacg
tacaaccccggagtcctcggactccatgaggaggtgatggacttctacaacttcatgtct
ccccggccagaggaagcagcaatgaggaaagaggtggtgaaccggatagagatggtcatt
aaggagctatggcccactgcagatgtccaaatatttggcagcttcagcacaggactctat
cttccgacaagtgacattgacctggtggtgtttgggaagtgggagcgcccgccgctgcag
gagctggaacaagctcttcgcaaacataacgtggcagaacccttctccatcaaagtgctg
gacaaagctacagtgccaatcatcaagctgacggaccaggagaccgaggtgaaggtggac
atcagtttcaatgtggagactggagtcaaggcggcaagcttcattaaagactatgtaaag
aagtatccagtgctgccttatctgatcttcgtgctgaagcagttcctgctgcagagagat
ctaaatgaagtcttcaccgggggaatcagctcttacagcctcatcctcatggtcatcagc
ttcctacagctacatcctcgcattgacgccaggaatcctactgagaacttgggcgtgttg
ctgatcgaattttttgagttgtacggccgccatttcaactacttgaaaacagggattcgc
atcaaaaatggaggcgcgtacatccccaaagaggagatcatgaagtccatgacaaatgga
tacaggccatcgatgctctgcatagaggacccactgcttcctggtaacgatgtggggaga
ggctcctacggcgccatgcacgtcaagcaggtgtttgactacgcctacaccgtcctgagt
cacgccgtgtcaccacttgcgcggtcatatcccaataaagagtgcgaaagcaccttgggc
aggatcatcaggttgacccaggaagtgatcgattacagggaatggatcatcaagaagtgg
gggggccgggatctggcacgaacagacaacagagtttcacctccaaaggagccggtgtcg
gagcaggagcttggcagcagcagcatcgggtcggaggagcagcagagggactcggcgtcg
ccccacagcgcagactcccccatgtccatctccagcccgcagcagcactcgtcggcgtcc
tccgtctcctcgctgtctggatcagacaatgactctgattcagcgttaccgtgtcctgtc
cctccgccgaccctgtcaccgtacccgtctttcccgccactgggcttaacgttgccaccg
ggactcaagcccggcatgggaggacaccatctgctcatacctccaggctcacaggctcgc
gtctcactgcccggtggtctagcaatgcactccatacctggcagacaggtgtgtatagac
accgggctcccccccttcttccacatgccctccctagcccatgctcatgcccccgccccc
tccagcccccagcctccgctcagcccccactccagccacacacacaagaacacaaccaag
ttaaatgtgaagggcttccacaacccgccgccggtcagcaaccctgtcctggccaaccgc
ggacacacacacacgcagtatcaccgcaacacttggcggcgcaggaagagggacagccta
ccggttagcctcagcagatag
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