Solea senegalensis (Senegalese sole): 122786022
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Entry
122786022 CDS
T07721
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122786022 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122786022 (bcor)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122786022 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
122786022
NCBI-ProteinID:
XP_043907953
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All DBs
Position
LG2:19691519..19728135
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AA seq
1830 aa
AA seq
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MVDARLTPLAAMGLDRGALMHDGLRLHGGVVYPGITALQGEKSREMPGIPLTYNRDGLPE
LIYKPDGPLDSRKSTNGYLGLYKGTPPSLHKPVLVPGAEGLERRVGPGEKGSELGLASAG
GSYLRLPWLSPYPEASMYPFMDTSKYAALNMYKASLLSQPNPYLPQHLPYPSLCAAQGGN
VNPAAASAAERLYYMPPYPPSPISSPLVAPPMRIPAVTVAPTSLVHCQDKGLGVPPPFAQ
QLHQPSPHSQHHQAAIDRDRSPSRSSRPSRPPSRKGSSNNNSSSTSSSSGTSGVNNNSLP
TDSSSHSSSRLPQPPPSPAHNESSSDLQRPVARIGQLPTSSSSSVSVSSSSIQSISHPFS
VSSMASEQPSPARPSPHKHRPRDGAPEHRGMGVERRPSRSPSKPNFERPPHQPQTTKDSA
EKPLDLSGRILEFGLPPNGFPVKMDTMAANARYGLPPSRELLKENLSHSPSSHPHSVVSS
TSSKVSERPEIISTLHSSWVVPSPSPSHTQHTSGLPSSPRSNADLGHSQAKGSSPSVIKH
KGLERVHPQQHSSSCPRIGEPNHNVSSTQQCGSSLANTRAHSPKPNGEWVKHSPSQSEHP
TSIGGHHREGTDKSSLSTKRGETIPEVSSYKRPCVENGLPPGHLYLPQSDAYLNHSLAYA
NRYLHYPIPDGMALHSLPMTGKGPVYPHPVLLGSNSLYPTHLAAKHPLPYHNIPAGPAGD
YLTYNSQEMAHPLMQTHADKLPERRDANMKPRGQERSQGGVEETGGHREHNIVKEIGEGI
QIKSGRDAGAQGQSGSQSKTPSSSVTSREKIVCIDLVHSDTDIETTPTVLKHPSAENSTK
VNQNECCHHNQNLTKTDYEPKHQHHLSHSYQIHPAHSPTLKSNHTERQSEPTLGRPKVHQ
DAPCLGVTSSTSPTSPGQISQADESMDEQSPSPDPGDQDQSTLRCARTSGERSSGKEKGD
RDCRPHHITQHCTDVLKVSDQEKVYETEKEDSIVDLGESQGEGDEEDDEDNHTLSKGCRS
SSLAKRIANSSGYVGDRFKCVTTELYADSSKLSREQRALQMEVISREGSNISQPAANWER
AMMRFSELELKEKEGGGVCVSASAAGRELADGQRRERALEHCQQPTRQGEREGVRPAYTN
NRVPVLQRCGGQREPLSPGQGARDGAKSACHSGLQDGTKRLMRESEGGHCLPPTLSPVKG
FTEEKDSHGFGPTRKRPLFTQAEQENMEREERDRGFLLEKRPKICTDEQASPDEDEDEEV
RKLKVCIELKGLRLSKQAAGAASPDGSHIKLERGWPQPRLVAQAQSIRERNIRPGEPEER
AAAQRAEINRKWGCEKLLNGVAASPLPPSQLKDRSYPLDPFSGDRGLKEPRRGPPSPAPE
PSMGATPPLKPRRHSDTDKPKGKRPFKTKHTSQREREREKRKEAAPNSPSQHCVADMGAA
EDDKLSEQRCAPRKRAASPNHYPCSPVKPCSPVALCPPSLQPQVNGRAASVPPEAAGIHR
TPPAEPPTVRPIPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENRVCEVNHRDYAG
YCALHEACARGWLSIVQHLLDYGADINCSAQDGTRPIHDAVENDHLDVVRVLLSYGADPT
LATYSGRGLLRMTHSDSMERFLTDYFADLQGRLDDDPGLYWEFYGSAVCESSEEGGIYDI
LADPPGPEDEDEDDKREVFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLRRLRMSAR
GFRQAFPHMEVVTVAEAEFYQQASLSQLFSCPEELEGFHPDSKELLDLVEDSAELAALLG
SSLECLDDRWDHPGDKLKDKIKTVGKLYSS
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttgacgcccctggcagcgatggggctggaccgaggtgctctgatg
catgatggccttcgcctccatggtggggttgtatacccaggaatcacagcactgcaaggg
gagaaaagcagagagatgcccggcatcccccttacttataacagggatggccttccagag
ctcatttacaagcctgatggccccctggacagtcgtaagtcaactaatggataccttggc
ctatacaagggcacccctccaagtctgcacaagcctgtgctggtgcctggagctgaaggt
ttagaacgtagagtagggccaggagaaaaaggatctgagctgggcttggcaagtgctggt
ggcagctatctccgcctgccatggctcagcccctaccctgaagcaagcatgtatcccttc
atggacacatccaagtatgcggctctgaacatgtataaagcttctttgctcagccaaccc
aacccctatcttccccagcacctgccctacccttctctgtgtgctgcgcagggtggtaat
gttaaccctgccgcagcatctgctgctgagaggctgtattatatgccgccatatcctcct
tctcccatctcctctcccctggtggcgccgcccatgaggattcctgctgtcacagtggcc
cccacgtcactggtgcactgccaggacaaggggcttggtgttccacccccatttgcacag
caacttcaccaaccttcccctcattctcagcaccaccaggctgctatagacagggaccgg
tctccaagcaggagcagtagaccaagcaggcctccctctaggaagggctccagcaacaac
aatagcagcagtacttctagctctagtggcaccagtggtgtgaataataatagtctgccc
actgattcttcttctcattcatcatctcgccttccccagcctcccccctcccctgctcac
aatgaaagttcatcagacctacaaagacctgttgctaggataggacagttacccacctcc
tctagttcttcagtatctgtctcatcgtcatccatacagtccatttctcacccattctct
gtgagcagcatggcttcggaacaaccctctcctgcccgacccagcccccacaaacacagg
ccaagagatggggcacctgagcacagaggtatgggggttgagaggagacccagcaggtcg
ccttccaaacctaattttgagaggccacctcatcaacctcaaacaaccaaagactcagca
gagaaacccttagatttgtcaggcagaatacttgagtttggactgcctcccaatggattt
ccagttaagatggacactatggcagcaaacgcacgttatggactgccccctagccgagag
ctcctaaaggaaaacctgtcccactccccctcctcccatcctcactccgtggtcagcagc
acttcttccaaggtctcagagaggccagagataatcagcactttacactcctcttgggtt
gtacctagcccttctccttcccatacacagcacacatcaggcctgccctcctccccgagg
tctaatgcagacctgggccattcacaagctaaaggctcctcaccctctgtcatcaagcac
aagggtttggagagagtacatcctcaacaacatagctcatcctgtccaagaattggggaa
cccaatcataatgtatcatctactcaacaatgtggctcttctctggccaacaccagggcc
cattctcccaaacccaatggagaatgggtcaaacacagccccagccaatcagaacatcca
acatcaattgggggccaccacagagaaggaacagataaatcctccctgagcactaagaga
ggagaaacaattccggaggtgtcatcatataaaaggccctgtgtagagaatggtctccct
cctggacacctgtacctccctcaaagtgatgcttacctgaaccacagtttggcctatgcc
aatagatacctgcactacccaatccctgatggcatggcactacactccttaccaatgaca
gggaaaggcccagtctaccctcatccagtactacttggtagcaatagcctttatcccact
cacctggcagcaaaacacccattaccataccacaacatcccagctggtccagcaggagat
tacctcacttataactcacaagagatggcccatcctctgatgcagactcatgcagacaag
ctgccagagaggagagatgcaaatatgaagccaagaggacaggagagatcacaaggtggt
gttgaagaaactgggggccacagagaacacaatattgtgaaggagataggtgaaggaatc
caaataaagtcgggtagggatgcaggagcacaaggacagagtggcagtcaaagcaaaacc
ccctcttcctctgtaacatccagagaaaagattgtatgcattgaccttgtgcactcagac
acagatattgagactacaccaacagtcctcaaacatccctctgctgaaaacagcaccaag
gtgaaccaaaatgaatgttgtcatcataaccaaaatctgacaaagactgactatgagcca
aaacaccaacaccacctttcccattcttatcaaatacaccctgcacacagtcccaccctg
aagtccaaccacactgagcggcagtcagaacctaccttggggagaccaaaagttcatcag
gatgcaccctgtcttggtgtgacatctagcacatccccaacttccccagggcagatttcc
caagcagatgagagcatggatgaacagagtcccagcccagaccctggagaccaagaccag
agcactctgcgctgtgcccgcacatctggggagcgcagctccggtaaggagaaaggggac
agggactgtcgacctcaccacatcacacagcactgcacagatgtgttgaaagtgtcagac
caggaaaaagtgtatgagactgaaaaagaagacagtattgttgacctgggagagtcacaa
ggagagggggatgaggaggacgatgaggataaccacaccttatctaaaggctgccgtagc
tccagtctggccaagaggattgcaaactcctcaggctacgttggcgaccgctttaaatgt
gtcaccactgagctgtatgctgactctagcaagctgagccgtgaacagagagcgcttcag
atggaagtcatatcacgagaggggagtaatataagtcaacctgcagctaactgggagcgg
gcaatgatgcggttctcggagctggagctgaaggagaaggagggcggcggtgtgtgtgtg
tctgcctcagcagcaggacgggagctggcagacggccagcgcagagagcgagcgctggaa
cactgccaacaaccaaccaggcagggagagagggagggtgtccggccggcgtacactaat
aacagagttccagtcctccagaggtgtgggggccagagggaacccttgtccccagggcag
ggggcccgagatggggccaaaagtgcctgccatagtgggctacaggatggaaccaagagg
ttgatgagagagtctgaaggaggccattgcctgccccccactctttcaccagtgaaaggg
tttactgaggagaaagacagtcatggctttggacccactcggaaacgtccactcttcacc
caggctgagcaggagaacatggagagggaggaacgagacagggggtttctcctggagaaa
agacccaagatttgtacagatgagcaggccagtcctgatgaagatgaggatgaagaggtg
cgcaagctcaaggtctgcattgagctgaagggactgcggctcagcaaacaagccgctggc
gcagcctcacctgatggatcgcacatcaaactggagagggggtggccccagccccgatta
gtcgctcaggcccagagcatacgggagcgcaacatcagacccggtgagccagaggagcga
gcggcagcccagagagctgagatcaacaggaaatggggctgcgagaagcttcttaatgga
gtagctgcttccccccttccccccagccagttgaaggacagatcgtacccactggacccc
ttctcaggtgaccgtggcctcaaggagcccaggaggggccccccctctccggccccagag
ccatccatgggagccactcctcccctcaagcctcgtcgccatagtgacacggacaaaccc
aagggcaagcggcccttcaagaccaaacacactagtcagagggagcgagaacgtgagaag
aggaaagaagccgctcctaacagccccagccagcattgtgtggctgatatgggagcagct
gaagatgacaagctgagtgagcagcgctgtgctccgaggaagagagccgcctctcctaat
cattatccctgctctccagtcaagccctgctcccctgtcgcgctctgcccgccctcgttg
cagcctcaggtgaatggcagagcggccagtgtcccaccagaggcagctgggattcaccgg
acgccccctgcagagccccccacggtgcgcccgatcccaccagaggctcgtcgactgatt
gtgaacaagaacgccggggagactctgctccagagagctgcgcgattaggctacgaggag
gtggtgctgtactgtctggagaacagagtgtgtgaggtgaatcacagagactacgccggt
tactgcgctctccatgaggcgtgtgcccgtggctggctcagcatagtacaacacctgctg
gattacggcgccgacatcaactgtagtgcacaggatggcaccagaccaattcatgatgcc
gtggagaatgaccacctggacgtagtgcgagttctgctgtcctacggtgccgaccctaca
ctggccacatactctggccgtggcctcctcaggatgacacacagtgacagcatggagcgc
ttcctgaccgattattttgctgaccttcagggccgcctggatgacgacccaggactttac
tgggaattttatggcagcgctgtgtgtgagtctagtgaagaaggcgggatctacgacatc
ctggctgacccaccaggcccagaggatgaggatgaggatgacaaaagggaggtgttcgaa
tttgagttctctgaccgacctctgctgccttgctacaacatccaggtgtccctttcccaa
gggcctagaaactggctgctactgtctgacgtgcttcgtcggctgagaatgtcggctcgt
ggtttccgacaggccttcccccacatggaagtggtgacggtggcagaggcagagttttac
cagcaagcctctctgtcgcagctcttctcctgccctgaggagctggagggcttccatcca
gacagcaaggagcttttagacctggtggaggacagtgccgagctggccgccctgctgggc
tcctcactggagtgtctggatgaccgctgggaccacccaggggacaaactgaaggacaaa
atcaaaactgttggcaagctatactcatcctga
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integrated database retrieval system