Solea senegalensis (Senegalese sole): 122786099
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Entry
122786099 CDS
T07721
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122786099 (irx1b)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122786099 (irx1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Phosphoprotein
Motif
Other DBs
NCBI-GeneID:
122786099
NCBI-ProteinID:
XP_043908059
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Position
LG20:17230000..17234254
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AA seq
476 aa
AA seq
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MSFPQLGYPQFLSAASQEVYGGERPASAREGGAEGGVCSTAATAAAVGSMLGMYGSPWVA
RNYSAFLPYSGATDLALISQMGSQYELKDSPGSHAASLPVHAAQGFYPYGQYPYGDPSRA
KTATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKV
TWGRSAEDRDGRIFSSDNEDEPGKNGSDNEDEDEEIDLETVDIERPEEQRADGQQSPDRV
EAEEDAEAEAEAEAEAGLSAREQASEARSAGSGRTLPVETGISLNKSPVVKLAVDHSPGR
QEYQRPAQSKPKIWSLAETATAPDSSHKLSSASHAHHPALASAGHPALLPGHGIYTCQIG
KLHNWANAAFLNANSLLNMRSFLGGGAPAGHLPLHGAVPAAARHDARPAAAAAAVGPGMS
GTEDDSDIESSGSFSPKRDDEESDHRPDSLKSHFQLIADRPHSGTTTSHRALTTTL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggatatcctcagttcctcagcgccgcctctcaggaggtgtac
gggggcgagcggccggcctctgcccgggaaggaggcgccgagggcggcgtgtgttccacc
gccgccaccgccgccgccgtgggctccatgctggggatgtacggaagcccgtgggtggcg
cgcaactacagtgcctttttgccgtatagcggagccacagacctcgccctcatttcccag
atgggctctcagtacgagctgaaggacagtccgggctcacacgccgcctcgctgcctgtc
cacgccgcacagggcttctatccgtacggacagtatccgtatggagacccgtccagggcc
aagacggccacgagggagaccaccagcaccctgaaggcctggctgcaggagcaccagaag
aacccgtacccgaccaaaggcgagaagatcatgctggccatcatcaccaggatgacactc
acacaggtgtcgacgtggttcgccaacgcacgcaggcgcctgaagaaggagaacaaggtg
acctggggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggac
gagccgggaaagaacggcagcgacaacgaagacgaagacgaggagatcgatttggaaact
gtggatatcgagagacccgaggagcagcgggcggacggccagcagagtcccgacagagtg
gaggcagaggaggacgcggaggcagaggcagaggcggaggctgaggcgggcctgtccgcc
cgggagcaggcctctgaggcgaggagcgcggggagcggcaggacgcttcctgtggaaacg
ggcatttctctcaataaatcgcctgttgtcaaactcgcagtggatcattcacccggcaga
caggagtaccagagacccgcacagagcaaacccaaaatctggtccttggctgagacggcc
acggccccggacagctcccataaactctcctccgcgagccatgcgcatcacccggctttg
gcctccgcgggccacccggccttactccccggacatgggatatatacatgccaaattggc
aagctgcacaactgggccaacgcggcttttctgaacgccaactcgcttttgaacatgagg
tcgttcctcggtggcggggcgcccgccggacaccttccgctccacggggcagtgccggcg
gcggcgcgtcatgacgcacgaccggcggcggcggcggcagcggtgggcccgggaatgtca
gggacggaggatgacagtgatatagagtcgtcggggagcttcagtccaaaaagagatgac
gaagagagcgaccacaggccggattccctcaagtcccacttccagctgatcgctgacaga
cctcacagtggaacaacgacatcacatcgagctctgacaacaacattatga
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