Solea senegalensis (Senegalese sole): 122786153
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Entry
122786153 CDS
T07721
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122786153 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122786153 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122786153 (vps28)
Membrane trafficking [BR:
ssen04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
122786153 (vps28)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122786153 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
122786153 (vps28)
Exosomal proteins of colorectal cancer cells
122786153 (vps28)
Exosomal proteins of bladder cancer cells
122786153 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
122786153
NCBI-ProteinID:
XP_043908147
LinkDB
All DBs
Position
LG20:complement(8021318..8025004)
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AA seq
223 aa
AA seq
DB search
MFHGIPVSGGVGGALANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTASCSRLLVQYKAAFKQVQASDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggataccagtttcagggggtgtagggggagctctggccaataaacctgag
ttgtatgaggaggtgaagttgtacaaaaatgcaagagaacgagaaaagtatgataacatg
gcagagttgtttgctgtagtaaagacccttcaggccctggaaaaggcttacattaaagac
tgtgtcacacctaatgaatacactgcttcttgttccagacttttggttcagtataaagct
gctttcaaacaggtgcaggcctctgatgttggctccatcgatgacttctgcaggaagtac
agacttgactgtccactcgccatggaaaggatcaaagaggatcggccaatcaccatcaag
gatgacaagggcaatctgaaccgctgcattgcagatattgtttctctcttcatcactgtg
atggacaaactgagactggaaatcagggccatggatgagatccagccagacctgagggag
cttatggagaccatgaacagaatgagcaacatgcctccagattcagaggctaaggacaaa
gtcagcctctggttgaccaccctcagcagcatgtctgcctcagatgaactggatgataat
caggtgcgccagatgctgtttgacctggagtcagcctacaatgccttcaaccgcttcctg
cactcctcttaa
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integrated database retrieval system
