Solea senegalensis (Senegalese sole): 122786270
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Entry
122786270 CDS
T07721
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122786270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122786270
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122786270
03012 Translation factors [BR:
ssen03012
]
122786270
04131 Membrane trafficking [BR:
ssen04131
]
122786270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122786270
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122786270
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122786270
Translation factors [BR:
ssen03012
]
Eukaryotic type
Elongation factors
122786270
Membrane trafficking [BR:
ssen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122786270
Exosome [BR:
ssen04147
]
Exosomal proteins
Proteins found in most exosomes
122786270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
122786270
NCBI-ProteinID:
XP_043908363
LinkDB
All DBs
Position
LG20:complement(12698632..12706361)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETNKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSAYIKK
IGYNPATVGFVPISGWHGDNMLEASDKMSWFKGWKIERKEGGATGTTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPPNLTTEVKSVEMHHESLT
EALPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPMAADNFTAQVIILNHPGQIAQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVEKKVASGGKVTKSAQKADKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagatccacatcaacatcgtggtcattggccatgtcgactccggcaaa
tccacgaccaccggccacctgatctacaagtgcggaggaattgacaagagaaccatcgag
aagtttgagaaggaagccgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggctgagcgtgagcgtggtatcaccattgacatcgctctgtggaagttt
gagactaacaagtactatgtgaccatcattgatgctcctggacacagggatttcatcaag
aacatgatcactggaacatctcaggctgactgcgccgtgctgatcgttgctgccggtgtt
ggtgagttcgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
tacaccctcggcgtgaagcagctcattgtcggagtcaacaagatggactccaccgagccc
ccttacagccagaagcgttttgaggaaatcaccaaggaagtgagcgcttacatcaagaag
atcggttacaacccagccactgttggctttgttcccatctctgggtggcatggagacaac
atgctggaggccagcgacaagatgagctggttcaagggctggaagattgagcgcaaagag
ggcggtgccactggtacaaccctgctggaggctctggactccatcctgcccccctctcgc
cccaccgataagcccctgcgtctgcccctgcaggacgtctacaagattggcggtattgga
acagttcccgtcggacgtgttgagaccggtatcctgaagcctggcatggtcgtcacattc
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgagtctctgact
gaggctctccccggtgacaacgtcggcttcaacatcaagaacgtgtccgtcaaggagatc
cgtcgtggaaatgtggccggtgacagcaagaatgacccaccaatggctgctgacaacttc
accgctcaggtcatcatcctgaaccacccgggacagatcgcacagggctacgcccccgtt
ctggattgccacaccgctcacattgcttgcaagttcagcgagctcaaggagaagattgac
cgccgttccggcaagaagcttgaggacaaccccaaggctctcaagtctggagacgctgcc
atcatcaccatggtgcctggaaaacccatgtgtgttgagagcttctcccagtatcctcca
ctgggtcgcttcgctgtgcgtgacatgaggcagaccgtggccgtcggtgtcatcaaatct
gtcgagaagaaggtcgcttccggcggaaaggtcaccaagtctgcacagaaggcagataag
aagaaatga
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integrated database retrieval system